Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3045 TCTGTATTGAGATGCTATTCTTTGGACACACCACAGGGAGACGTGATCAAGAAGTCTGAAACTCAAGGGTTCAACCCAGTATTAATAATTCTCCTGCTTGTTGGTGGGCTGCTATTGACATTCCTCATTGGAAATTATATACTTTACATGTATGCACAGAAGAACCTCCCTCCCAGAAAAAAGAAGCCAGTCTCTAAGAAAAAGATGAAAAGGGAGAGACTGAAGCAGGCTGTTTCCGCTCCTGGAGAATAG 252 0.4246 SVLRCYSLDTPQGDVIKKSETQGFNPVLIILLLVGGLLLTFLIGNYILYMYAQKNLPPRKKKPVSKKKMKRERLKQAVSAPGE 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3045 83 MobiDBLite consensus disorder prediction 59 73 - -
Prci3g3045 83 Pfam DNA binding protein S1FA 19 83 IPR006779 GO:0003677|GO:0005634|GO:0006355
Prci3g3045 83 PANTHER DNA-BINDING PROTEIN S1FA2 12 83 IPR006779 GO:0003677|GO:0005634|GO:0006355
Prci3g3045 83 MobiDBLite consensus disorder prediction 58 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3045 Prci-Chr3 41898200 41898661 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Prci3g3045 S1FA 7.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3045 - - csin:114281244 107.071