Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3044 ATGTTGGTACTTTCCTTTGCATCTTCGAGTCCCATCATTGCCACTTTTACACTTTTCCTCTGCTTTTTCAACACTGTCTTTACTTTCGCAGCCACTGAATTCGACTTTGGCACCTTAACTTTAAGCAGCTTGAAGCTTCTGGGCGACGCTCACTTGAACAATGGCAGCGTCAGCCTCACCCGGGACCTCGCCGTCCCTAACTCTGGCGCTGGCAGGGCTCTCTACTCCAAACCAGTGAGATTCCGTCAACCTGGCGCTCGTTCTCCGGCGAGTTTCAAGACTTATTTCTCGTTCTCAGTCACCAACCTGAATCCAGGGTCCATCGGTGGCGGACTCGCTTTCCTGATCGCGCCGGACGATGAAACCGTCGGTGACGCCGGTGGTTCTCTTGGCCTCCTTAACGCGAAGAGCGCCGCCCCCTTAGGTTTTCTGGCGGTTGAGTTCGACACGCTCATGGACGTAGAGTTCAAGGACCTTAATGGAAACCATGTGGGTCTGGACCTAAACAGCATGGTTTCAACGGAAATTGGTGACTTGGGACCCATTGGAATCGATCTCAAAAGCGGTGATCTCGTGAATGTATGGATCGAGTACGACGGCTCAACCCTGGGCTTTAACATCTGGGTTTCGTACTCCAATCTGAAACCGAAAGAACCCCTTTTGACATTCAATCTCGATCTAAATCAGTACGTTAATGATTTCATGTACGTAGGTTTCTCTGGCTCTACGCAGGGAAGTACCGAAATTCACAGCATCCAATGGTGGAGCTTCAGCTCTTCTTTTGAACCGTCCTCATCTTCCCAGCCGGGTTCATCGGTGACGGCGCCGCCGCCCCCAACCGTCACTTTGATGAACCCAACCGCTAATTCCGTCACGTCGCCGCCTCCATCATTAGGTCCTTCTTCCGATTCAGCGTCAAGCACTCAACAAAAGGACAGTAAATCGTCCTGCCACAATGAACTCTGCAAGCAAGGTCCAGGAGCCGTTGCAGGTGTTGTGACGGCGGGGGCTTTTGTTCTGGCTCTGTTCGCCGGCGCATTAGTTTGGGTGTACTCCAAAAAGGTCAAACAAGTCAACAAGTCCGACTCACTTGCGTCAGAAATCATCAAAATGCCAAAAGAGTACAGCTACAAGGAGCTCAGAACAGCCACCAAGTGCTTTAATGCCAATAGAATAATCGGTCACGGCGCATTTGGGACGGTCTACAAGGGAATATTACCAGAGAACGGCGGCATTGTAGCGGTGAAAAGATGCAGCCATACAAGTCAGGGGAAGAACGAATTTTTATCAGAATTATCTATAATCGGGAGTCTCCGACATCGGAATCTTGTCCGTCTCCAAGGTTGGTGCCACGAAAAGGGTGAAATCTTACTAGTCTATGACTTAATGCCCAATGGGAGTCTCGATAAAGCTCTGTTCGAGGCGAGAACAACTCTTCCATGGCCTCAGAGGCACAAAATTTTGTTGGGCGTCGCCTCCGCTCTGGCCTACTTGCACCAAGAATGCGAAAACCAGGTAATTCACAGAGACGTCAAGACCAGCAACATCATGTTAGACGAAGGCTTCAATGCACGATTGGGCGACTTCGGATTGGCGAGGCAGACAGAACACGACAAGTCTCCAGACGCTACGGTGGCCGCCGGAACGATGGGTTACCTGGCCCCAGAATATCTCCTAACAGGCAGGGCCACAGAAAAAACAGACGTGTTCAGCTACGGCGCGGTGGTTCTGGAGGTGGCCAGCGGAAGAAGACCCATAGAGAGAGACGCTAACGGGAGCAATCTGGTGGAATGGGTATGTCTGCATCGAGAAGGGAAATTGCTGGTGGCGGCTGATCCAAGGCTGGAGGGTGAGTTCGGCGACGAAGAGATGAGGAGGGTGCTCATGGTGGGGCTAGCGTGCTCGCACCCTGACTCGCTGGCCAGGCCCACCATGCGTGGGGTGGTTCAGATGCTGGTGGGCGAGGCTCAGGTGCCCAGTGTTCCCACGACCAAACCTGCCCCTACTCTGAGTACCTCCCAGCTCTTGTTGAGTTTACAGGACAGTGTGTCTGACTTCAACGGTCTGATCCCCATGTCGTCTTCCTCGTCGGAGCACAGCTTCCACGGCGGAGATATTGTGTGA 2124 0.5245 MLVLSFASSSPIIATFTLFLCFFNTVFTFAATEFDFGTLTLSSLKLLGDAHLNNGSVSLTRDLAVPNSGAGRALYSKPVRFRQPGARSPASFKTYFSFSVTNLNPGSIGGGLAFLIAPDDETVGDAGGSLGLLNAKSAAPLGFLAVEFDTLMDVEFKDLNGNHVGLDLNSMVSTEIGDLGPIGIDLKSGDLVNVWIEYDGSTLGFNIWVSYSNLKPKEPLLTFNLDLNQYVNDFMYVGFSGSTQGSTEIHSIQWWSFSSSFEPSSSSQPGSSVTAPPPPTVTLMNPTANSVTSPPPSLGPSSDSASSTQQKDSKSSCHNELCKQGPGAVAGVVTAGAFVLALFAGALVWVYSKKVKQVNKSDSLASEIIKMPKEYSYKELRTATKCFNANRIIGHGAFGTVYKGILPENGGIVAVKRCSHTSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTTLPWPQRHKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIERDANGSNLVEWVWXLHREGKLLVAADPRLEGEFGDEEMRRVLMVGLACSHPDSLARPTMRGVVQMLVGEAQVPSVPTTKPAPTLSTSQLLLSLQDSVSDFNGLIPMSSSSSEHSFHGGDIV 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3044 708 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 266 IPR013320 -
Prci3g3044 708 Gene3D - 28 274 - -
Prci3g3044 708 MobiDBLite consensus disorder prediction 284 315 - -
Prci3g3044 708 FunFam L-type lectin-domain containing receptor kinase VIII.1 351 462 - -
Prci3g3044 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Prci3g3044 708 MobiDBLite consensus disorder prediction 266 319 - -
Prci3g3044 708 Pfam Legume lectin domain 32 267 IPR001220 GO:0030246
Prci3g3044 708 ProSiteProfiles Protein kinase domain profile. 387 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3044 708 SUPERFAMILY Protein kinase-like (PK-like) 369 690 IPR011009 -
Prci3g3044 708 CDD lectin_legume_LecRK_Arcelin_ConA 48 255 IPR001220 GO:0030246
Prci3g3044 708 FunFam L-type lectin-domain containing receptor kinase VIII.1 463 671 - -
Prci3g3044 708 CDD STKc_IRAK 393 653 - -
Prci3g3044 708 SMART serkin_6 387 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3044 708 Gene3D Transferase(Phosphotransferase) domain 1 463 661 - -
Prci3g3044 708 FunFam L-type lectin-domain containing receptor kinase VIII.1 30 271 - -
Prci3g3044 708 ProSitePatterns Protein kinases ATP-binding region signature. 393 416 IPR017441 GO:0005524
Prci3g3044 708 PANTHER - 55 663 - -
Prci3g3044 708 Pfam Protein kinase domain 388 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3044 708 Gene3D Phosphorylase Kinase; domain 1 348 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3044 Prci-Chr3 41886188 41888639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3044 17 688 Receptor kinase-like Gene Family AT3G53380 70.262 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci3g3044 Pkinase 4.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3044 - - qsa:O6P43_006685 1087.4