Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3038 ATGAGGTTCATCCTTCAATTGGGCTTTCTCTGCATAACCGCGACTTGCTCACACGTCATGGAAGTGTTTGATTTATATTTAGCATCCAGATTGTCAGTCATTTGCAGGTCTGTCTTTAACTACGGTGTCTATCCTGAGATTGCAAGTGCTATGAGTCATAGGCATTTGTATAACACATCTCAAATGTTTGAGAGTGATCATGACCAAAATTGGAATTCTATGCATACTGACCAACAGTATGTGCACCTTGGTAGAGCTAGCACTTCAGAGAATGGTTCTTTCATTTACCCTGTGGAAAATATGTCTATAGATGGCATTTCTTTTACCTCTAATTGGAATTCTACCACAATGCCAAATGGATTTGCATCCTCAAGTCTCAATATTGAAGTACCACCTCATCAGTCTGACACATCGGGCGCTTCTCATGACCATTTTCTGCATTCATCAAGTGCTGCAGCCTTCTTTGCAGTTTCTGAAAATTATGCTCATCAGCCTTCTTCTTCCAATTATGATAGACAGCCATTTCACATCGTTGATGGTGGTTTTGTTGATCTTACAATGGGAAGTGGAAGAGGGCCTCACAAACGGAAGAGCCCTGGAATTCCTCCAGCCTGTGAGAGAGGTAGTACAAGTAGATACATAAAAACTGGAAGTTCAACTGATCTTCCTATGTCTTCAGAACTATGGCAGGAGAAGCCAAATATGGATTCTCAATTTGTGCCTCGAGATCAAGTTACCATGCCAACAACCTTTAGAGGTGGTGACCTTTCAATCAGGGGTGAGGGTTCCTTGAGAAACGTGAGAAGCCGTTCTGCACTTGATTTTGAATCCAACCTGGCCAGGACCCATTTATCTGGCAATCATTCACACAACTACTCCACTGGTCTACCCATTGACCATTCTAGCACAGTGGATCTCTCAGGTCAGAGTTCTAGTGCATTAACGAGGGATTGGAGCCAAATGAGCACATCTCATGCTCATGGCAGGTTATTACCAGATACAAGTGCTCTTAATTGTGAGACAAGTCACTTCCTTGTTGGGAGTAGTGCTAGTAATCCATCCGTAGATATTGGGGGTTACCAGCATGAATTTGGTACAAGCAGAAATCCTATTGTACCTCAAAGTTTTCATAATAATCTGACTCAGACAGCTAGGGGAGTGCGAAGCAACTTTTCACAAAGGTCTACTCCACCTTTTAGATCTTCTTCAAGCTTGCGCTTAGGGCATGTGGCACCATCAGATGATGGAATGCAAATGGTTGCTGGTAGTTACTCCTCAAGACACCCAAGGCCATTAACAACCATTGGCTGGAGGAACAGTGACAGAAATGGAAGGTCAAGGATATCTAGTGATAGATATCGACCATCAGTAGAGGCATCTCTCCACGATCGATTTTCTTCAGAGGGTTTCGTGATTGTTGATCGTGGGTTGCCATATGGATCTAGAAGTATGGTTGATCAGCATAGGGACATGAGGATGGACATAGACAACATGAGCTATGAGGAACTACTTGCCCTTGGAGAGAGGATTGGTCATGTCAGCACAGGCTTGTCTGAGGATTTGATTTCAAAATGCATGACGGAAACAATATATTGTTCATCTGAGCAAAGTCAGGAGGAAGGAACTTGTGTTATCTGTTTGGAAGAATACAAGAATATGGATGATGTTGGGACGCTGAAAACTTGCCGTCACGACTACCATGTGAGCTGCATAAGAAAGTGGTTATCTATGAAGAACAAATGTCCAATCTGCAAAGCTTCTGCTTTGCCAGACGACGTGAAGGAGAAATAA 1791 0.4299 MRFILQLGFLCITATCSHVMEVFDLYLASRLSVICRSVFNYGVYPEIASAMSHRHLYNTSQMFESDHDQNWNSMHTDQQYVHLGRASTSENGSFIYPVENMSIDGISFTSNWNSTTMPNGFASSSLNIEVPPHQSDTSGASHDHFLHSSSAAAFFAVSENYAHQPSSSNYDRQPFHIVDGGFVDLTMGSGRGPHKRKSPGIPPACERGSTSRYIKTGSSTDLPMSSELWQEKPNMDSQFVPRDQVTMPTTFRGGDLSIRGEGSLRNVRSRSALDFESNLARTHLSGNHSHNYSTGLPIDHSSTVDLSGQSSSALTRDWSQMSTSHAHGRLLPDTSALNCETSHFLVGSSASNPSVDIGGYQHEFGTSRNPIVPQSFHNNLTQTARGVRSNFSQRSTPPFRSSSSLRLGHVAPSDDGMQMVAGSYSSRHPRPLTTIGWRNSDRNGRSRISSDRYRPSVEASLHDRFSSEGFVIVDRGLPYGSRSMVDQHRDMRMDIDNMSYEELLALGERIGHVSTGLSEDLISKCMTETIYCSSEQSQEEGTCVICLEEYKNMDDVGTLKTCRHDYHVSCIRKWLSMKNKCPICKASALPDDVKEK 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3038 596 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 508 589 IPR013083 -
Prci3g3038 596 MobiDBLite consensus disorder prediction 387 412 - -
Prci3g3038 596 Pfam Ring finger domain 542 585 IPR001841 -
Prci3g3038 596 SUPERFAMILY RING/U-box 532 589 - -
Prci3g3038 596 MobiDBLite consensus disorder prediction 431 452 - -
Prci3g3038 596 MobiDBLite consensus disorder prediction 387 408 - -
Prci3g3038 596 SMART ring_2 543 584 IPR001841 -
Prci3g3038 596 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 191 589 IPR045191 GO:0061630
Prci3g3038 596 FunFam E3 ubiquitin-protein ligase MBR2 isoform A 508 589 - -
Prci3g3038 596 CDD RING-H2_RNF24-like 541 588 - -
Prci3g3038 596 ProSiteProfiles Zinc finger RING-type profile. 543 585 IPR001841 -
Prci3g3038 596 MobiDBLite consensus disorder prediction 190 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3038 Prci-Chr3 41848973 41853918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3038 51 594 C3H Transcription Factor Family AT2G37150 41.935 3.98e-112 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3038 - - gmx:100803627 826.624