Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3037 ATGGAAGGGGGTGAATTTCTTCATTTGGTTTTGCCCGGGCATTTGCATTGTGCTGGTTATGAAAGACGATTGTCAGTCATTTGCAGGTCTGTCTTTAACTACGGTGTCTATCCTGAGATTGCAAGTGCTATGAGTCATAGGCATTTGTATAACACATCTCAAATGTTTGAGAGTGATCATGACCAAAATTGGAATTCTATGCATACTGACCAACAGTATGTGCACCTTGGTAGAGCTAGCACTTCAGAGAATGGTTCTTTCATTTACCCTGTGGAAAATATGTCTATAGATGGCATTTCTTTTACCTCTAATTGGAATTCTACCACAATGCCAAATGGATTTGCATCCTCAAGTCTCAATATTGAAGTACCACCTCATCAGTCTGACACATCGGGCGCTTCTCATGACCATTTTCTGCATTCATCAAGTGCTGCAGCCTTCTTTGCAGTTTCTGAAAATTATGCTCATCAGCCTTCTTCTTCCAATTATGATAGACAGCCATTTCACATCGTTGATGGTGGTTTTGTTGATCTTACAATGGGAAGTGGAAGAGGGCCTCACAAACGGAAGAGCCCTGGAATTCCTCCAGCCTGTGAGAGAGGTAGTACAAGTAGATACATAAAAACTGGAAGTTCAACTGATCTTCCTATGTCTTCAGAACTATGGCAGGAGAAGCCAAATATGGATTCTCAATTTGTGCCTCGAGATCAAGTTACCATGCCAACAACCTTTAGAGGTGGTGACCTTTCAATCAGGGGTGAGGGTTCCTTGAGAAACGTGAGAAGCCGTTCTGCACTTGATTTTGAATCCAACCTGGCCAGGACCCATTTATCTGGCAATCATTCACACAACTACTCCACTGGTCTACCCATTGACCATTCTAGCACAGTGGATCTCTCAGGTCAGAGTTCTAGTGCATTAACGAGGGATTGGAGCCAAATGAGCACATCTCATGCTCATGGCAGGTTATTACCAGATACAAGTGCTCTTAATTGTGAGACAAGTCACTTCCTTGTTGGGAGTAGTGCTAGTAATCCATCCGTAGATATTGGGGGTTACCAGCATGAATTTGGTACAAGCAGAAATCCTATTGTACCTCAAAGTTTTCATAATAATCTGACTCAGACAGCTAGGGGAGTGCGAAGCAACTTTTCACAAAGGTCTACTCCACCTTTTAGATCTTCTTCAAGCTTGCGCTTAGGGCATGTGGCACCATCAGATGATGGAATGCAAATGGTTGCTGGTAGTTACTCCTCAAGACACCCAAGGCCATTAACAACCATTGGCTGGAGGAACAGTGACAGAAATGGAAGGTCAAGGATATCTAGTGATAGATATCGACCATCAGTAGAGGCATCTCTCCACGATCGATTTTCTTCAGAGGGTTTCGTGATTGTTGATCGTGGGTTGCCATATGGATCTAGAAGTATGGTTGATCAGCATAGGGACATGAGGATGGACATAGACAACATGAGCTATGAGGAACTACTTGCCCTTGGAGAGAGGATTGGTCATGTCAGCACAGGCTTGTCTGAGGATTTGATTTCAAAATGCATGACGGAAACAATATATTGTTCATCTGAGCAAAGTCAGGAGGAAGGAACTTGTGTTATCTGTTTGGAAGAATACAAGAATATGGATGATGTTGGGACGCTGAAAACTTGCCGTCACGACTACCATGTGAGCTGCATAAGAAAGTGGTTATCTATGAAGAACAAATGTCCAATCTGCAAAGCTTCTGCTTTGCCAGACGACGTGAAGGAGAAATAA 1770 0.4311 MEGGEFLHLVLPGHLHCAGYERRLSVICRSVFNYGVYPEIASAMSHRHLYNTSQMFESDHDQNWNSMHTDQQYVHLGRASTSENGSFIYPVENMSIDGISFTSNWNSTTMPNGFASSSLNIEVPPHQSDTSGASHDHFLHSSSAAAFFAVSENYAHQPSSSNYDRQPFHIVDGGFVDLTMGSGRGPHKRKSPGIPPACERGSTSRYIKTGSSTDLPMSSELWQEKPNMDSQFVPRDQVTMPTTFRGGDLSIRGEGSLRNVRSRSALDFESNLARTHLSGNHSHNYSTGLPIDHSSTVDLSGQSSSALTRDWSQMSTSHAHGRLLPDTSALNCETSHFLVGSSASNPSVDIGGYQHEFGTSRNPIVPQSFHNNLTQTARGVRSNFSQRSTPPFRSSSSLRLGHVAPSDDGMQMVAGSYSSRHPRPLTTIGWRNSDRNGRSRISSDRYRPSVEASLHDRFSSEGFVIVDRGLPYGSRSMVDQHRDMRMDIDNMSYEELLALGERIGHVSTGLSEDLISKCMTETIYCSSEQSQEEGTCVICLEEYKNMDDVGTLKTCRHDYHVSCIRKWLSMKNKCPICKASALPDDVKEK 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3037 589 FunFam E3 ubiquitin-protein ligase MBR2 isoform A 501 582 - -
Prci3g3037 589 SUPERFAMILY RING/U-box 525 582 - -
Prci3g3037 589 CDD RING-H2_RNF24-like 534 581 - -
Prci3g3037 589 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 501 582 IPR013083 -
Prci3g3037 589 MobiDBLite consensus disorder prediction 183 217 - -
Prci3g3037 589 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 185 582 IPR045191 GO:0061630
Prci3g3037 589 SMART ring_2 536 577 IPR001841 -
Prci3g3037 589 MobiDBLite consensus disorder prediction 380 405 - -
Prci3g3037 589 Pfam Ring finger domain 535 578 IPR001841 -
Prci3g3037 589 MobiDBLite consensus disorder prediction 424 445 - -
Prci3g3037 589 ProSiteProfiles Zinc finger RING-type profile. 536 578 IPR001841 -
Prci3g3037 589 MobiDBLite consensus disorder prediction 380 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3037 Prci-Chr3 41847616 41853918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3037 44 587 C3H Transcription Factor Family AT2G37150 41.935 5.29e-112 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3037 - - gmx:100803627 826.624