Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3033 ATGCTTAATCTCCTGGGTTTATCATCCACCATGGACGCGGTAGGGTGGAGAGGATTGCTCTACTCAATCTCCATTCTCAATTTTGTTTTGGTCTGCCAGCTCATTCTCCTTCAACCCCTGGTTTCCTGTTCAGAGGGAAAACCTGGAAATGCTGCTGAGTTATTTGAGAGGGTGTCACAGAGTATAAAAGTTAAACGTTATACTGAGGCGCTTGATGATTTAAATGCTGCCATTGAAGCAGATCCAACCCTTTCAGAAGCATACCTTCGCCGTGCATCACTTCTTCGTCAAATATGCAGATACAAGGAATCTGAGGGGAGCTACAGAAAGTTTTTGGAGCTTAAACCTGGAAATTCAGCAGCGGAAAAGGAGCTCTCTCAATTGTTGCAGGCTCAAAGTGCTCTAGAAACAGCTCAGTCATTCTTTGATTCAGGCAACTTCTCAAAATCCTTGGAATACATCAATAAAATTGTACTTGTTTTTTCTCCTGAATGCTCGAAGGCTAAGCTTTTAAAAGTAAAGTTGTTGGTAGCTGATAAAGACTATGAAGGGGCCATTGCAGAGTCTGGATTCATTCTTAAGGAAGATGAGAATAATTTGGAGGCATTGTTGTTTCGGGGGCGTGCATACTATTATTTAGCTGATCATGATGTTGCCATGAGGCATTACCAGAAAGGCCTCCGCCTAGACCCTGAGCACAGTGAACTGAAAAAAGCATATTTTGGATTGAAAAATCTACTGAAAAAGAGTAAAAGTGCTGAAGATAATGTGAGTAAGGGTAAACTGCGTTTGGCTGTTGAGGAATTCAAAGCAGCACTGGCAGTTGATCCTAATCATCTTGCACATAATATACATCTTCATCTTGGTTTATGTAAAGTTCTGGTGAAGCTCGGTAGGGGAAAAGATGCTTTGGACAGTTGTGATGAAGTTCTTAAGATCAATGAGGAACTAGTTGAAGCTCTTGTTCAGAGGGGAGAAGCTAAACTTTTAACAGAGGATTGGGAGGGAGCAGTGCAAGATCTGAAATCAGCGGCTCAAAAATCTCCTCAGGATACGAATATTCGTGAAGCTTTGATGAGGGCTGAGAAAGCTTTGAAGATAAGCAAGCGCAAAGATTACTACAAGATTCTGGGAATTTCAAAAATGTCTTCTATGGCTGAGATAAAACGTGCCTACAAGAAACTTGCTTTGCAATGGCACCCTGATAAGAACGTGGACAACAATGAAGCAGAGGCTAAATTCCGAGAAATTGCTGCTGCATATGAGGTTCTTAGTGACGAAGATAAACGTACCAGATATGACAGGGGGGAAGACATTGAAGACATGGGAATGGGTGGGGGAGGCGGAGGTTTCAACCCCTTTGGTGGTGGGGGCCAACAGTTCACCTTTCATTTTGAGGGAGGCTTCCCCGGTGGCTTCGGTGGAGGCTTTCCTGGCGGCGGCGGCGGCGGCTTTGAGTTTCATTTTTGA 1470 0.4361 MLNLLGLSSTMDAVGWRGLLYSISILNFVLVCQLILLQPLVSCSEGKPGNAAELFERVSQSIKVKRYTEALDDLNAAIEADPTLSEAYLRRASLLRQICRYKESEGSYRKFLELKPGNSAAEKELSQLLQAQSALETAQSFFDSGNFSKSLEYINKIVLVFSPECSKAKLLKVKLLVADKDYEGAIAESGFILKEDENNLEALLFRGRAYYYLADHDVAMRHYQKGLRLDPEHSELKKAYFGLKNLLKKSKSAEDNVSKGKLRLAVEEFKAALAVDPNHLAHNIHLHLGLCKVLVKLGRGKDALDSCDEVLKINEELVEALVQRGEAKLLTEDWEGAVQDLKSAAQKSPQDTNIREALMRAEKALKISKRKDYYKILGISKMSSMAEIKRAYKKLALQWHPDKNVDNRXEAEAKFREIAAAYEVLSDEDKRTRYDRGEDIEDMGMGGGGGGFNPFGGGGQQFTFHFEGGFPGGFGGGFPGGGGGGFEFHF 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3033 490 ProSiteProfiles TPR repeat profile. 85 118 IPR019734 GO:0005515
Prci3g3033 490 Pfam DnaJ domain 372 435 IPR001623 -
Prci3g3033 490 Pfam Tetratricopeptide repeat 64 119 - -
Prci3g3033 490 SUPERFAMILY TPR-like 62 367 IPR011990 GO:0005515
Prci3g3033 490 Gene3D DnaJ domain 370 480 IPR036869 -
Prci3g3033 490 ProSiteProfiles TPR repeat profile. 200 233 IPR019734 GO:0005515
Prci3g3033 490 PANTHER DNAJ PROTEIN P58IPK HOMOLOG 23 490 IPR044620 -
Prci3g3033 490 SMART tpr_5 200 233 IPR019734 GO:0005515
Prci3g3033 490 SMART tpr_5 284 317 IPR019734 GO:0005515
Prci3g3033 490 SMART tpr_5 51 84 IPR019734 GO:0005515
Prci3g3033 490 SMART tpr_5 85 118 IPR019734 GO:0005515
Prci3g3033 490 SMART tpr_5 318 351 IPR019734 GO:0005515
Prci3g3033 490 Pfam Tetratricopeptide repeat 201 233 IPR013105 -
Prci3g3033 490 SUPERFAMILY Chaperone J-domain 366 476 IPR036869 -
Prci3g3033 490 ProSitePatterns Nt-dnaJ domain signature. 415 434 IPR018253 -
Prci3g3033 490 PRINTS DnaJ domain signature 374 392 IPR001623 -
Prci3g3033 490 PRINTS DnaJ domain signature 392 407 IPR001623 -
Prci3g3033 490 PRINTS DnaJ domain signature 410 430 IPR001623 -
Prci3g3033 490 PRINTS DnaJ domain signature 430 449 IPR001623 -
Prci3g3033 490 Coils Coil 408 408 - -
Prci3g3033 490 Coils Coil 410 428 - -
Prci3g3033 490 CDD DnaJ 372 427 IPR001623 -
Prci3g3033 490 ProSiteProfiles dnaJ domain profile. 372 438 IPR001623 -
Prci3g3033 490 Coils Coil 118 138 - -
Prci3g3033 490 SMART dnaj_3 371 430 IPR001623 -
Prci3g3033 490 Gene3D Tetratricopeptide repeat domain 42 369 IPR011990 GO:0005515
Prci3g3033 490 FunFam DnaJ domain containing protein 38 369 - -
Prci3g3033 490 FunFam DnaJ subfamily C member 7 370 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3033 Prci-Chr3 41807153 41811964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3033 368 435 C2H2 Transcription Factor Family AT1G74250 48.611 2.02e-11 64.3