Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3026 ATGAAGATTCTCTGTTCTCTGTCTGCTTGTTTCTCACGATCGGTTCAACACCAAACCGAGCAAGGCAGAGAGAGTGAAGGAACATTTCGTGTATTTACATACAGCGAATTAAAATCCGCGACCCAGCGTTTCGATTCCTCGAACAAGATTGGAGAAGGCGGTTTCGGCACCGTGTACAAGGGGCGGCTTCTGGACGGCACATTTGTGGCAGTCAAAGTGCTTTCGATCGAACTGGATTCCCTGCAGGGCGAGAAGGAATTTGTAGCAGAACTGGGCACGTTGGGCGATATTAAGCACGAGAATCTAGTCACTCTTCGAGGCTGTTGCGTGGAAGGAGCTCACAGATACTTGGTCTACGAGTACATGGAAAACAACAGCCTTCACCACTACTTTTTAGGTTCACAGGAGGGCAGGATGAGATTCAACTGGGAATCAAGGAGGGACATATGCATAGGAGTGGCCAGAGGGCTTGCCTACCTTCACGAGGAAATTAGACCCTATATTGTGCACAGGGACATCAAAGCCAGAAATATACTCCTTGACCGACGTCTGAGGCCGAAACTTTCCGACTTTGGCCTGGCAAAGTTACTGAGAGACGACAAGTCTTACGTTAGCACTCAAGTTGCGGGGACATTGGGTTATCTGGCTCCGGAATATGCCAGTTCTGGGAAGGTAACGAGAAAATCAGATGTTTATAGCTACGGAGTGTTAGTCCTCGAAATTGTGAGCGGCCTGCCAGTGGTCGATCCCTATCAGGACACGGAACGTTTCCTGGTTGAGAAGGCGTGGTCGGCGTATGAAGGCGGTGATGTGGCGAAAATGGTGGATGCAGAGCTGAAGGAGAGATGGCCAGAGGAAGAAGGCGCGAGATTCCTGAAGGTGGGGCTGCTTTGCGTGCAAGAAACGGCGAAGCTGAGGCCACGAATGACACAAGTAGTAGAAATGTTGAGCAACAAGATCGATATGGCGAGTGTGAGCATTTCAAAACCAGGGGTGGTGGCTGATCTCAGGGCTATCCGAATCAGAGAGCCGTCCCATTCATCAGAAGTATCCTCCTCCGGCGCAGCTACCTTTGCAACTTCCATCTGGAGCTCCTCCAATCTAGCCCGTTGA 1113 0.5058 MKILCSLSACFSRSVQHQTEQGRESEGTFRVFTYSELKSATQRFDSSNKIGEGGFGTVYKGRLLDGTFVAVKVLSIELDSLQGEKEFVAELGTLGDIKHENLVTLRGCCVEGAHRYLVYEYMENNSLHHYFLGSQEGRMRFNWESRRDICIGVARGLAYLHEEIRPYIVHRDIKARNILLDRRLRPKLSDFGLAKLLRDDKSYVSTQVAGTLGYLAPEYASSGKVTRKSDVYSYGVLVLEIVSGLPVVDPYQDTERFLVEKAWSAYEGGDVAKMVDAELKERWPEEEGARFLKVGLLCVQETAKLRPRMTQVVEMLSNKIDMASVSISKPGVVADLRAIRIREPSHSSEVSSSGAATFATSIWSSSNLAR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3026 370 FunFam Putative LRR receptor-like serine/threonine-protein kinase 122 328 - -
Prci3g3026 370 CDD STKc_IRAK 50 316 - -
Prci3g3026 370 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 28 349 - -
Prci3g3026 370 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Prci3g3026 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Prci3g3026 370 FunFam Serine/threonine-protein kinase receptor 14 121 - -
Prci3g3026 370 SUPERFAMILY Protein kinase-like (PK-like) 25 316 IPR011009 -
Prci3g3026 370 ProSiteProfiles Protein kinase domain profile. 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3026 370 Pfam Protein tyrosine and serine/threonine kinase 47 316 IPR001245 GO:0004672|GO:0006468
Prci3g3026 370 Gene3D Transferase(Phosphotransferase) domain 1 122 329 - -
Prci3g3026 370 SMART serkin_6 44 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3026 370 Gene3D Phosphorylase Kinase; domain 1 6 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3026 Prci-Chr3 41760413 41762434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3026 31 335 Receptor kinase-like Gene Family AT1G56120 52.288 6.33e-97 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci3g3026 PK_Tyr_Ser-Thr 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3026 - - gmx:100813945 494.582