Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3025 ATGTCACGACCCAGCGAGCTGTATCGCTCCCTTCCAAACCTATCCTCAACCCTCGGTCGGATCATGCAAGTCCTCTGTGCGCACAGCTTTCGAGGGATTTCTTCATCTGTCTTTCTTCAGCTTCTTCTCTTCCTGTGCTCGTCTTGCGCGCATGGGTTTGGGACGATGGGGCCAATATCGGCCTCGTTGGGTAAATATGAATTCTTCTGCGCCATCGATGCAAGTGGGAAGCAGGATGTTATTTGTTGGGGGAAGAACAATACTTCTGCAGCTCCGCCGTCTTCTCCGGCTTCAGCCTCTGTCACTGACAACCCTCCGATGGCAGCTTTATCCGGTGGCGAAGGGTTTATGTGTGGCATTCTAGCAAGCACTTCGCAAGCATACTGCTGGAGCGCCACAAAACCAGCAATAGATCTTGTGCCTCCTGCGTACCAATCCTATACTTATTCTCAAATAGCAGCGGGCAAGAATCATGTTTGTGCCATTAGGGGATCTTATTATTCTAATGAGGATGCCGGAAATGTTGATTGCTGGGAAATCGTGAGAACTGCGGACAACAGCTTAAAATGGAAACAGAGCGATTTGTATTACGATCAGTCAACTAGCAATCTCGCATTAGGCAAAGTTGTTGCGGGTGAGGGATTCTCTTGCGGAGCGGTCAGAGACGGAGGGCTTGTGTGCTGGGGACCTACATCCGCGAGCTTGGGTGTATCGAATGTGTCCGAGAACTTTGCGGTCTTAGTTTCGGGAAGGAGTTCAATTTGTGGGCTTTTGAACGTTTCCGGAGATTTGAAATGTTGGGGTGATGCAGATTCATTTGCTGATCCACCTGATGGGGTTGGATTAACCTCTCTGTCAGCCGGGGCTCGCCATTATTGTGGCATTCGAGCAGATAATCATTTAGTGGAGTGCTGGGGGAGTTTCAATTCGTCTGTGGTTCCAAAAGGTTCTGGATTCATGGCAATTGCTTCTTCAGATTATACAACTTGTGGCGTTAGAGAAGAAGATCTTCTGATTGACTGCTGGTTGGTGAACGCGTCCACGGCTGAGTTTGATCCTCCATTGGAATTATCAAGTCCGGGTCTCTGCAGTGCCAGTTCATGCAGCCAAGGTGAGTTTGCTTTCAATGTTAGTGTTCTGAATGAGCCAGGTTTAACAAGCCTCTGCGTTCGAAGAGATTTGAGGATCTGTTCCCCCTGTGGCACAAATTGTTCAGAAGGCTTTTTCTTGTCCAGTCCATGCACTGAGAATTCTGATAGAGTATGCGCTGCTTGTTCTCTTTGCCAAAATAGCTCATGCTGGGATGTTTGTCGACATGAGTCATCTCCAGATATTGTTCACAACAATAGTTGGCACCATTTGCGTCGATTACTGATCCTAATTGGGTCAGCCACTTTGGGATTCTTGTTAATCATGACTTGTGGGTGTATTCTTCCATGTTTGATCACCAAGAAAGAATCCAAATCTGGCACGGCCAAACCAGAGCAGCAAGTTGATCCTAATGTTGATCTTCACTCTTTTCCTTCAACAACTTCCTGTCCCGGGATGCCTCAGATTTTCCGACTCTCGGAGCTAAAGGACGCCACCAATGGGTTCAAGGAATTCAACGAGCTTGGTAGAGGAAGTTATGGTTTTGTATACAAAGCTGTGTTAGCAGATGGGAGGGTAGTTGCGGTAAAGAGGGCGAATGCCGCCACAATAATCCACACCAACAATCGCGACTTCGAAATGGAACTGGAAATCCTCTGCAAAATCCGTCACTGTAATATCGTGAACCTGATTGGTTACTGTGCAGAGATGGGAGAGAGGCTTCTTGTTTACGAGTATATGCCACACGGCACTCTTTATGATCACCTTCATGGTGGGCTTTCTCCTCTGAATTGGAGCCTCAGGCTGAAGATATCAATGCAAACTGCAAAAGGACTTGAGTATCTTCAAAAGGAACTAGCGCCACCGATTGTGCACAGGGATCTGAAGAGTTCGAACATTCTCTTGGATTCTGAGTGGGGAGCGAGAATTTCAGACTTTGGGCTCATATCCAGTGACAGAGATCAAAATGGGGACGTGCAGAGCGATGTTTACAACTTTGGGATGGTGTTGCTTGAGATTCTGAGTGGAAGAAAAGCTTATGACGGAGATTTTACGCCTCCCAATATAGTTGAGTGGGCAGTGCCTCTGATCAAACAGGGGAAGGCTGCTGCCATAATTGATCGCTCCGTCCCTCTTCCAAGGATCGTAGAGCCATTGCTGAAGCTTGCTGATATTGCAGAGCTTGCTGTGAGGTACAATCCGAGCGAGCGTCCGGGTATGTCAGATATAGCATCTTGGTTGGAGCAGATTGTGAAGGACGGTCTGATCTTATGA 2364 0.4763 MSRPSELYRSLPNLSSTLGRIMQVLCAHSFRGISSSVFLQLLLFLCSSCAHGFGTMGPISASLGKYEFFCAIDASGKQDVICWGKNNTSAAPPSSPASASVTDNPPMAALSGGEGFMCGILASTSQAYCWSATKPAIDLVPPAYQSYTYSQIAAGKNHVCAIRGSYYSNEDAGNVDCWEIVRTADNSLKWKQSDLYYDQSTSNLALGKVVAGEGFSCGAVRDGGLVCWGPTSASLGVSNVSENFAVLVSGRSSICGLLNVSGDLKCWGDADSFADPPDGVGLTSLSAGARHYCGIRADNHLVECWGSFNSSVVPKGSGFMAIASSDYTTCGVREEDLLIDCWLVNASTAEFDPPLELSSPGLCSASSCSQGEFAFNVSVLNEPGLTSLCVRRDLRICSPCGTNCSEGFFLSSPCTENSDRVCAACSLCQNSSCWDVCRHESSPDIVHNNSWHHLRRLLILIGSATLGFLLIMTCGCILPCLITKKESKSGTAKPEQQVDPNVDLHSFPSTTSCPGMPQIFRLSELKDATNGFKEFNELGRGSYGFVYKAVLADGRVVAVKRANAATIIHTNNRDFEMELEILCKIRHCNIVNLIGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLNWSLRLKISMQTAKGLEYLQKELAPPIVHRDLKSSNILLDSEWGARISDFGLXISSDRDQNGDVQSDVYNFGMVLLEILSGRKAYDGDFTPPNIVEWAVPLIKQGKAAAIIDRSVPLPRIVEPLLKLADIAELAVRYNPSERPGMSDIASWLEQIVKDGLIL 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3025 788 ProSitePatterns Protein kinases ATP-binding region signature. 538 560 IPR017441 GO:0005524
Prci3g3025 788 SMART serkin_6 532 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3025 788 Pfam Protein tyrosine and serine/threonine kinase 536 685 IPR001245 GO:0004672|GO:0006468
Prci3g3025 788 FunFam Serine/threonine-protein kinase-like protein CCR1 687 785 - -
Prci3g3025 788 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 36 782 - -
Prci3g3025 788 FunFam Serine/threonine-protein kinase-like protein CCR1 610 686 - -
Prci3g3025 788 Gene3D - 198 371 IPR009091 -
Prci3g3025 788 Gene3D Phosphorylase Kinase; domain 1 502 609 - -
Prci3g3025 788 SUPERFAMILY RCC1/BLIP-II 59 310 IPR009091 -
Prci3g3025 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Prci3g3025 788 SUPERFAMILY Protein kinase-like (PK-like) 506 779 IPR011009 -
Prci3g3025 788 SMART TNFR_3 389 422 IPR001368 GO:0005515
Prci3g3025 788 Gene3D Transferase(Phosphotransferase) domain 1 610 785 - -
Prci3g3025 788 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 367 422 IPR001368 GO:0005515
Prci3g3025 788 Gene3D - 51 194 IPR009091 -
Prci3g3025 788 ProSiteProfiles Protein kinase domain profile. 532 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3025 788 FunFam serine/threonine-protein kinase-like protein CCR1 501 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3025 Prci-Chr3 41751983 41754910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3025 37 780 Receptor kinase-like Gene Family AT3G59420 31.618 1.04e-112 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Prci3g3025 PK_Tyr_Ser-Thr 9.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3025 - - gmx:100802259 1132.86