Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3016 ATGGGCTTCCAATACGTCTTCTTCCCGGTAAAGAATCACAGGTTGAAGCAGAGCTCTATGGCTTCAGGTGAACCAAGAACTGTTAGGTTTCATGATGATCTCGAGACTGAGATGAAAGAAAGCAAAGAAAGTCCCGTGTCCATGCCGACCTATAAGATGAATGGCAAACAGATGGACGTATGGAAGGAAAGGGAACTTTCGAGGGTCTTCTCTGAGGATTATGATTCCTCAGACAAGTTGATATTGGACCCCAGGGGACCAAGAGTGAACAGATGGAACAAAATCTTCTTAGTGGCATGTCTGGTTTCCTTATTTGTGGATCCCTTGTTCTTTTACTTGCCAGTGGCCAAGAAAGACAAGTGCATTGATTTATCCCTCAGCCTCGAAGTGTTTCTCACCGTAGTTCGCTCCATGGTTGATGCATTTTACATATTTCAGATTTATGTTCGCTTTCAAACAGCTTACGTTGCTCCTTCCTCTCGTGTATTTGGTAGAGGAGAGCTCATCATAGACCCTTCCAAGATATCATCCAAGTACCTTCAAAGAGATTTCTGGCTTGATGTTTTGGCTGCCCAACCTCTTCCTCAGGCGTTAATATGGCTTGTAATTCCAAATCTCAAGTGTTCACAAATGATTACTTCAAGGCATATACTGCGCCTCGCTACCATCTTCCAGTACCTTTTAAGGTTATGTCTCATCTTCCCTCTATCATCGCAAATCGTCAAGGCGAATGGGGTAATGATGGAAAAAGCTTGGGCTGGGGCAGCGTATAATCTCATGCTGTATATGCTAGCAAGTCATGTTTTAGGGTCGTGCTGGTACCTCCTATCAATTGAAAGGCAGGAGGAGTGCTGGAAAAAAGTTTGTTCTCTTCAACAACCGCACTGCCAGTATTATTATCTGGAGTGTGGAAGCGTAGGCGTTCCGCAGAGGGTAGCTTGGTTCAGAACAAGCAATGTCTCGGGTCTATGTGATCCCAGTAGTAATTTCTTTCAATTTGGCATTTTTGCTGACGCGCTGACTTCGGGAATCACGGGCTCCGAGTTCTTCATCAAGTACTTTTACTGTCTTTGGTGGGGGCTGAGGAATCTCAGCTCTCTGGGACAGAACCTCTTAACAAGCGCTGATATTGCTGAGATTAATTTTGCTGTGATCATTGCAATTCTTGGCCTGGTACTTTTCGCCCAGCTTATAGGCAACATGCAGATGTACCTGCAATCCACAACCATGAGGCTGGAAGAATGGAGAATAAGAAGGACAGATACAGAGAGATGGATGCGCCACAGGCAGCTACCTCGTGATCTGAAACAACACGTTCGACGATACGAGCAATTCAGATGGGTTGCGACCCGTGGAGTCGAAGAGGAAGTCATCCTCAGAGACCTTCCTGCAGATCTCAGACGTGACATCAAACGTCACCTCTGCGTCAATCTAGTCCGACAAGTACCACTATTTGATCAGATGGATGAGAGGATGCTGGATGCCATATGCGAGAGGCTAAAGCCATCCCTGTGCACCCCCGGGACGAGGCTAGTTCGCGAAGGTGATCCTGTGAATGAGATGCTCTTCATAGTTCGAGGTCGCTTGGATTCATACACAACCAATGGCGGCCGAACCGGGTTCTTCAATTCCTGCAGAATAGGGCCGGGTGATTTCTGCGGCGAAGAGCTGCTGCCATGGGTTCTGGACCCTCGTCCCAGCGTGGTGCTTCCTTCGTCGACTCGCACCGTAAAAGCCATAACCCACGTGGAAGCTTTTGCACTCATAGCTGAGGACTTACAGTTCGTGGCAGACCAGTTCCGGAGACTGCACAGCAAACAGCTGAGGCACACCTTTAGGTTTTACTCTCAGCAATGGAGGACATGGGCTGCTTGCTTCATTCAAGCGGCTTGGTTTAACTATAAGAGGAGAAGAGAGGCCGGTGAGCTCAAGAAGCAGCAGAATCTCGTGGCGGTATTCTCTGTGCCTCCAAGTTGCACCGCCATGGAATATTTCTCTGCACCTCTGCAACCCCGCGCGGAGTCCATCATTACGAGGTATCCCATGAGAGGTGGGAGCTTACGATATGGTTCTGATCTTGACGTTCTTGGTTCGTTGAGAAAGCCTGTTGAACCTGACTTCACCGTGCAAGATACATGA 2139 0.4792 MGFQYVFFPVKNHRLKQSSMASGEPRTVRFHDDLETEMKESKESPVSMPTYKMNGKQMDVWKERELSRVFSEDYDSSDKLILDPRGPRVNRWNKIFLVACLVSLFVDPLFFYLPVAKKDKCIDLSLSLEVFLTVVRSMVDAFYIFQIYVRFQTAYVAPSSRVFGRGELIIDPSKISSKYLQRDFWLDVLAAQPLPQALIWLVIPNLKCSQMITSRHILRLATIFQYLLRLCLIFPLSSQIVKANGVMMEKAWAGAAYNLMLYMLASHVLGSCWYLLSIERQEECWKKVCSLQQPHCQYYYLECGSVGVPQRVAWFRTSNVSGLCDPSSNFFQFGIFADALTSGITGSEFFIKYFYCLWWGLRNLSSLGQNLLTSADIAEINFAVIIAILGLVLFAQLIGNMQMYLQSTTMRLEEWRIRRTDTERWMRHRQLPRDLKQHVRRYEQFRWVATRGVEEEVILRDLPADLRRDIKRHLCVNLVRQVPLFDQMDERMLDAICERLKPSLCTPGTRLVREGDPVNEMLFIVRGRLDSYTTNGGRTGFFNSCRIGPGDFCGEELLPWVLDPRPSVVLPSSTRTVKAITHVEAFALIAEDLQFVADQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWFNYKRRREAGELKKQQNLVAVFSVPPSCTAMEYFSAPLQPRAESIITRYPMRGGSLRYGSDLDVLGSLRKPVEPDFTVQDT 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3016 712 CDD CAP_ED 484 615 IPR000595 -
Prci3g3016 712 Gene3D Helix hairpin bin 411 475 - -
Prci3g3016 712 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 66 657 - -
Prci3g3016 712 Pfam Cyclic nucleotide-binding domain 507 594 IPR000595 -
Prci3g3016 712 Gene3D - 95 408 - -
Prci3g3016 712 Gene3D Jelly Rolls 482 602 IPR014710 -
Prci3g3016 712 SUPERFAMILY Voltage-gated potassium channels 83 406 - -
Prci3g3016 712 ProSiteProfiles cAMP/cGMP binding motif profile. 484 569 IPR000595 -
Prci3g3016 712 FunFam Cyclic nucleotide-gated ion channel 1 482 600 - -
Prci3g3016 712 SMART cnmp_10 484 615 IPR000595 -
Prci3g3016 712 Pfam Ion transport protein 92 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci3g3016 712 SUPERFAMILY cAMP-binding domain-like 414 606 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3016 Prci-Chr3 41702222 41705132 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3016 62 710 Ion Channels AT2G28260 65.231 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3016 K05391 - gmx:100815543 1068.53