Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3008 ATGGAAATGAATGGAATTAAGAACAACGCCTCCTGGGTTGCTCTTGTTTTATTGTTCTCATTAGTTTCTTTAAGTCTGCTACCACGGACTCAATGTGCAGACGGGGATAGCGCTAATCCCAGTGTGCTTCCAATAGTAACGCAAAAAATCTATGAACGACTTACAAATGTCACGACAGATTTAACCAAAGACATCAAGACTAATCTAGGCTTCTGCATAAAGGATGTGAATAGAGATTGGGATGGAGCATTTAATTTTACGGGAAAACTGGACTTTCTGACAGCTTGTATTAAACAGATAAAAGGAGATCTTACATATCGAATATGCAGCACAGCCGAAATAAGGTTCTACTTCAATTCTTTCAAGAGTCAGTCATCGAGAAACCTAAGACCTAACAGGAATTGCAATTTGACATCATGGGTGGAAGGTTGTGAACCTGGTTGGCATTGTAGTGTAAGCACAGGCGTTGACCCTAAATATTTAAGGGAGTCGAAAGACATTCCTCTAAGAAACAAGGACTGTCAACCTTGTTGTGAGGGTTTTTTCTGCCCTCGAGGGTTGACTTGCATGATACCTTGCCCACTGGGTTCTTATTGTCCCCTTGGAAAACTGAACAAAACGAGTGGATTATGTTCACCATATCATTACCAGATACCTTCTGGAGCGACAAATCATAGTTGTGGTAGCGCTGATATTTGGACTAATGTTGTCAACAACAGTGATATCTTCTGTTCTCCAGGATCATACTGCCCTACCACGACAAGTAAACTTTCCTGCAGTAAGGGACATTACTGCTGGATGGGTTCCTTGCTTCAAAAGCAATGCTTCAAGTTGAGTACCTGTAATCCAAATACAGCAAACCAGAATATTCATGCTTATGGGGCTTTACTTCTTGCTGCATTGACTGCTGCCCTGCTCATCATTTATAACTGTTCTGATCAAGTTCTGTCAACTCGAGAAAGAAGGCAGGCTAAAAAAAGGGAAGCTGCAGCCAAGCATGTGAGAGAAACTGCACAAGCTCGTGAACGGTGGAAATCAGCAAAAGATGTGGCCAAGAAGGGTGCAGCGGGATTGCAACAGTCATTCTCACGCACCTTTTCTCGCAGGAAGTCTACACAACAGTCATCTGGGTTCAAGATCTTTAGCACCAAAACTAATACAAGTGACGCTCCAGTGCTATCAATTCCTCTGGATTCTTTAAATGAATCTTCAAAAACAAAGGAACCTAGCAAACTTACACAAATGATGAATTCCATTGAGAATGATCCAAATAATCATCAAGGGTTTCATTTGAATATTGGAAGTAAAAATACTAAAAAGCAGACAGCAAAGGATTTGCATACAAAGAGCCAAATTTTCAAGTATGCCTATGGTCAGATTGAGAAGGAGAAAGCCATGCAAGATGCGAACAAGAACTTGACTTTCTCGGGAGTGATTTCAATGGCTGCTGGAAACGAGATTAGGAAACGGCCTCCTATTGAGGTAGCTTTCAAAGACCTAACTCTCACTCTGAGAGGGAAAAACAAACATGTGCTGAGATGCGTGTCCGGAAAAATCAGTCCCGGTCGAGTTTCAGCTGTCATGGGCCCCTCAGGAGCTGGGAAAACCACGTTTCTCTCGGCCATTGCGGGAAAAGCAAGAGGTTGTTCGGTGACAGGCTCAATTTTAATTAATGGAAGACATGAATCTATACACTGTTATAAAAAAATTATAGGTTTTGTGCCACAAGATGATATTGTGCATGGCAACCTGACAGTGGAAGAGAATCTTCGTTTCAGTGCAAGATGCAGACTATCTGCGGACTTGCCAAAACCAGATAAGGTTCTGATTATTGAAAGAGTAATTGAATCCTTGGGACTTCAGGCAGTGAGGGATTCCATAGTTGGAACAGTAGAGAAGCGAGGTATTTCTGGAGGACAAAAAAAACGTGTAAATGTAGGACTAGAGATGGTGATGGAGCCTTCTTTATTAATATTGGATGAGCCTACAACTGGCCTAGACAGTGCATCTTCTAGTTTGCTTCTCAAAGCACTCCGACGAGAGGCTCTTGAAGGGGTGAACATTTGCATGGTGCTTCACCAACCAAGCTATACTTTGTTCAGAATGTTTGATGATATTGTATTTCTAGCCAAAGGTGGCTTTACTGCATATCATGGTCCTGTTAAAAGAGTGGAAGAATACTTTGCTGGCATAGGAATCATTGTACCTGATCGGGTGAATCCTCCGGACCATTTCATTGACGTTTTGGAAGGCTTAGTAAAACCAAGTGCAGGTGTGACTCATCAACAGCTCCCTGTCCGATGGATGCTTCATAATGGTTATGCAGTACCGCCGGATTTACTTCATTTTGCTGATGAGATTGCTGCATCTGGAACTGCATCTACCTCAAATTCAAGTGGTGCAAAAAAAGGTACTGATGAAGATGCTGATCAATCCTTTGCCCAAGAGTTTTGGCAAGATGTGAAGAGTAATATGCACATCAAACGAGATCATGTAGAGGAAAAATTATCGAAGACTAAGGATTTATCTGGCCGAATAACTCCTGGTGTAGCCCGGCAATATAGATACTTCCTTGGGCGGGTGGGGAAGCAGCGGCTACGAGATGCCCAATCGCAAGTAGTGGACTGTCTCATCTTATTAGTTGCTGGTGCTCTGTTAGGAACTCTAACTGAATCCAATGATGAAACATTTGGGGTCCTTGGTTATACTTATACTGTCATTGCTGTCTCACTACTATGCAAGATATCAGCTCTCAGATCATTTTCTCTTGATAAATTAGAGTACTGGAGGGAGAGTGCCGCTGGGATCAGCACTCTGGCTCATTTTCTCTCCAAGGATACAATTGATCTCTTCAACACAATCGTCAAACCTGTGGTATATTTGTCCATGTTCTTCTTCTTCAGCAATCCGAGGTCAAGCTTTGCAAGCAATTACGTGGTCTTGCTTTGTCTTGTATATTGTGTGACTGGCATGGCCTATGCAATAGCCATTTACTTCCAGCCTGGTCCTGCACAGCTGTGGGCAGTGCTGCTCCCTGTCGTTATGTCTCTCATTGCTAATCAGCCTAGAGATACTACACTAATGAAGATACTGGTACAACTGTGCTACCCAAAATGGGCTCTAGAGGCCTTTGTCATCGCAAATGCTGAGAGGTACTCTGGAGTATGGTTGATAACTCGTTGCAGTTCACTAATGGCCAATGATTATAACGTCAACGATTGGAGTCTCTGTCTAATTGTGCTGGTTTTTTTCGGCATACTTGCCCGAGTTGTGGCCTTCTTTTGTCTTCTTCTCTCTCGAAAGAAGTGA 3309 0.4267 MEMNGIKNNASWVALVLLFSLVSLSLLPRTQCADGDSANPSVLPIVTQKIYERLTNVTTDLTKDIKTNLGFCIKDVNRDWDGAFNFTGKLDFLTACIKQIKGDLTYRICSTAEIRFYFNSFKSQSSRNLRPNRNCNLTSWVEGCEPGWHCSVSTGVDPKYLRESKDIPLRNKDCQPCCEGFFCPRGLTCMIPCPLGSYCPLGKLNKTSGLCSPYHYQIPSGATNHSCGSADIWTNVVNNSDIFCSPGSYCPTTTSKLSCSKGHYCWMGSLLQKQCFKLSTCNPNTANQNIHAYGALLLAALTAALLIIYNCSDQVLSTRERRQAKKREAAAKHVRETAQARERWKSAKDVAKKGAAGLQQSFSRTFSRRKSTQQSSGFKIFSTKTNTSDAPVLSIPLDSLNESSKTKEPSKLTQMMNSIENDPNNHQGFHLNIGSKNTKKQTAKDLHTKSQIFKYAYGQIEKEKAMQDANKNLTFSGVISMAAGNEIRKRPPIEVAFKDLTLTLRGKNKHVLRCVSGKISPGRVSAVMGPSGAGKTTFLSAIAGKARGCSVTGSILINGRHESIHCYKKIIGFVPQDDIVHGNLTVEENLRFSARCRLSADLPKPDKVLIIERVIESLGLQAVRDSIVGTVEKRGISGGQKKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIVFLAKGGFTAYHGPVKRVEEYFAGIGIIVPDRVNPPDHFIDVLEGLVKPSAGVTHQQLPVRWMLHNGYAVPPDLLHFADEIAASGTASTSNSSGAKKGTDEDADQSFAQEFWQDVKSNMHIKRDHVEEKLSKTKDLSGRITPGVARQYRYFLGRVGKQRLRDAQSQVVDCLILLVAGALLGTLTESNDETFGVLGYTYTVIAVSLLCKISALRSFSLDKLEYWRESAAGISTLAHFLSKDTIDLFNTIVKPVVYLSMFFFFSNPRSSFASNYVVLLCLVYCVTGMAYAIAIYFQPGPAQLWAVLLPVVMSLIANQPRDTTLMKILVQLCYPKWALEAFVIANAERYSGVWLITRCSSLMANDYNVNDWSLCLIVLVFFGILARVVAFFCLLLSRKK 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3008 1102 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 248 1090 - -
Prci3g3008 1102 Gene3D - 485 730 IPR027417 -
Prci3g3008 1102 FunFam ABC transporter G family member 24 489 731 - -
Prci3g3008 1102 Pfam ABC transporter 514 663 IPR003439 GO:0005524
Prci3g3008 1102 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 492 718 IPR027417 -
Prci3g3008 1102 Pfam ABC-2 type transporter 693 1102 IPR043926 GO:0140359
Prci3g3008 1102 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 495 736 IPR003439 GO:0005524
Prci3g3008 1102 ProSitePatterns ABC transporters family signature. 636 650 IPR017871 GO:0005524|GO:0016887
Prci3g3008 1102 CDD ABCG_EPDR 492 719 - -
Prci3g3008 1102 SMART AAA_5 521 713 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3008 Prci-Chr3 41631504 41639622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3008 514 712 Calmodulin-binding Proteins AT2G36910 29.469 4.91e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3008 - - gmx:100812387 1560.43