Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3005 ATGAAGTGCTTTTTATTCCACTGCGGAGATAAGAAGGATAATCCGAAGAGCATTAAGTCAATTTCGGGTCTGTCCAACAGTTCCATATATGGCGAGGGTGATCTGAGAAGATCTGGCTCTGAATTAAATTCTCAGAATGTTTCCGACAATAGCAATGACTCCCTTAGGAGAAATTCGTTTCCCAGTCTGTCTCAAAGACCCAGCAACCTGAGAGTGTTTACGGTCTCTGAACTGAAATCAGCCACAAAAAATTTTGGCCGCACTGTTATGATTGGAGAGGGTGGGTTTGGCTGTGTCTACAAGGGATTGATCAAGGGTTTAGAGGACTCATCCAGAAAAACTGAAGTTGCAGTTAAACAACTTGGTAGAAGAGGAATGCAGGGCCATAAGGAATGGGTGACAGAAGTGAATGTTCTGGGCATTGTTGAGCACCCTAATCTTGTGAAACTTGTGGGTTACTGTGCTGATGATGATGAAAGAGGAATCCAGCGGCTTCTGGTTTATGAATATATGCCCAACAGAAGTGTGGAACACCATTTATCCCCCCGATCGGAGGTCCCTCTCTCATGGAGTAAGAGGTTAAAAATAGCTCAGGACGCAGCTCGTGGCTTAACGTATCTTCATGAAGAAATGGATTTTCAGATAATCTTCAGAGATTTCAAATCTTCCAATATCCTTTTGGACGATCACTGGAATGCAAAGCTTTCTGATTTTGGATTGGCAAGATTGGGCCCATCTGAAGGGTTAACTCATGTCTCAACAGCGGTTGTAGGAACAATGGGATATGCAGCTCCTGAATATATTCAAACTGGACGCCTTACATCAAAAAGTGATGTGTGGAGCTATGGTGTATTTCTCTACGAACTCATCACCGGCAGGCGTCCTGTGGATCGAAATCGTCCCAAGGGTGAACAAAAACTCTTGGAATGGGTGAGGCCATACTTATCAGATGGGAAAAAATTTCAACTAATACTGGATCCAAGGCTTGACAGGAAACCCCTCTTCAAGTCAGCACAGAGACTTGCCATTATAGCTAACCGATGCTTGGTCAAAAACCCGAAGAATCGCCCAAAAATGAGTGAGGTACTGGAAATGGTGAATCGACTTGTGGAATCTTCTACTGCCACTAGTCCACAGATACCCTTGAAGAATTTGGCAGCTGCCGAAGTTTCTCAGGGAACTGAAAAGAAGAAGAGAAGGATCATGGATCTGAAACCTGGAGAAAATAGTTGGTTTGTTTGGTTGTGGAGACCAAAGCTTTTAAAAGTATGTTGA 1275 0.4353 MKCFLFHCGDKKDNPKSIKSISGLSNSSIYGEGDLRRSGSELNSQNVSDNSNDSLRRNSFPSLSQRPSNLRVFTVSELKSATKNFGRTVMIGEGGFGCVYKGLIKGLEDSSRKTEVAVKQLGRRGMQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLVYEYMPNRSVEHHLSPRSEVPLSWSKRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDDHWNAKLSDFGLARLGPSEGLTHVSTAVVGTMGYAAPEYIQTGRLTSKSDVWSYGVFLYELITGRRPVDRNRPKGEQKLLEWVRPYLSDGKKFQLILDPRLDRKPLFKSAQRLAIIANRCLVKNPKNRPKMSEVLEMVNRLVESSTATSPQIPLKNLAAAEVSQGTEKKKRRIMDLKPGENSWFVWLWRPKLLKVC 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3005 424 Gene3D Transferase(Phosphotransferase) domain 1 171 386 - -
Prci3g3005 424 FunFam Serine/threonine-protein kinase PCRK2 171 379 - -
Prci3g3005 424 PANTHER OS01G0588500 PROTEIN-RELATED 51 368 - -
Prci3g3005 424 MobiDBLite consensus disorder prediction 35 63 - -
Prci3g3005 424 Pfam Protein tyrosine and serine/threonine kinase 90 364 IPR001245 GO:0004672|GO:0006468
Prci3g3005 424 Gene3D Phosphorylase Kinase; domain 1 65 170 - -
Prci3g3005 424 SUPERFAMILY Protein kinase-like (PK-like) 59 366 IPR011009 -
Prci3g3005 424 CDD STKc_IRAK 91 369 - -
Prci3g3005 424 FunFam Serine/threonine-protein kinase BIK1 52 170 - -
Prci3g3005 424 ProSiteProfiles Protein kinase domain profile. 85 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3005 424 ProSitePatterns Protein kinases ATP-binding region signature. 91 119 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3005 Prci-Chr3 41625383 41629225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3005 1 369 Glycoside Hydrolase AT3G07070 43.008 1.89e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci3g3005 PK_Tyr_Ser-Thr 8.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3005 - - qsa:O6P43_010275 694.501