LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci3g2945	ATGCCTTGCTCACTTGGCCTCTTATCTTCCCCAGTGTTCCCTCCTCAGAAAACTAGCTCGCTCATTCTAAAATCTTATCCACTTCATCGTCTCTCTGTCAATTCATCCATTGATAAAAACTCCACCACCAATTCTAGCAGCAGCAACAATAAATCCAGTTCCTGGGTCAGCCCAGATTGGCTGACTTCATTGACTAGGTCCCTTACCTCGGGAAAAGACGATTCTGGCATTCCTGCTGCAAGTGCCAAACTCGACGATGTTTCTGACCTTCTCGGCGGCGCTCTTTTTCTCCCACTCTTTAAATGGATGAATGAGTACGGCCCCATTTACCGACTCGCCGCAGGTCCTAGAAATTTTGTGGTGGTTAGTGACCCTGCTATAGCGAAGCATGTTCTAAGGAATTATGCTACATATGCAAAGGGCCTTGTTTCCGAGGTTTCGGAGTTCCTGTTTGGGTCCGGTTTTGCAATTGCTGAGGGCGCACTCTGGACGGTAAGGCGCAGGGCCGTGGTTCCATCTCTTCATAAACGCTACTTGTCTGTTATGGTTGATCGGGTATTTTGTACATGTGCTGAGAGACTAGTGGAGAAGCTACAATATGATGCACTGAATGGAATTCCAGTTAACATGGAGGAGAAGTTTTCACAGTTGACTCTAGATGTTATTGGTTTGTCTGTATTCAACTACAACTTTGATTCACTTAATGCAGATAGTCCTGTTATTGAGGCTGTTTACACTGCATTGAAGGAGGCAGAAGCTCGTTCAACTGATATTTTGCCATATTGGAAGGTTAACGTTCTTTGCAAAATAATCCCTAGACAAATAAAAGCTGAAAAAGCTGTAAACATAATCAGGAAAACTGTTGAAGAACTTATTGTAAAATGTAAAGAGATTGTGGAGGCTGAGGGTGAAAGAATTGATGGTAGTGATGAATATGTGAATGACTCTGATCCTAGTATCCTTCGGTTCCTGCTTGCGAGCAGAGAAGAGGTTTCCAGTCTGCAGCTACGGGATGATCTTTTGTCACTATTAGTTGCTGGCCATGAAACCACTGGTTCAGTTTTAACCTGGACACTTTATCTTCTTAGTAAGAATTCTTCCTCATTGGGCAAAGCACAGGAAGAGGTGGACAGAGTTTTACAAGGAAGACGTCCTACCTATGAAGATATCAAAGATCTTAAGTTCTTGACACGCTGCATTATTGAGTCACTTCGGCTTTATCCACATCCTCCTGTCTTGTTAAGAAGAGCTCAAGTTCCTGACATGCTTCCTGGAGATTACAAGGTTGATGCTGGTCAAGATATTATGATTTCTGTATATAACATACATCATTCTTCAGAGGTTTGGGAGAGAGCTGAAGAGTTTTTGCCAGAAAGATTTGATTTGGATAGGCCAGTCCCAAACGAAACAAATACAGATTTCAGATTTATTCCATTCAGTGGAGGACCCCGCAAGTGTGTTGGTGATCAGTTTGCTTTATTGGAAGCAACAGTTGCTCTCGCAATCTTTCTTCAGCACATGAATTTTGAACTGGTTCCTGATCAGAATATTAGTATGACGACTGGAGCAACTATACATACGACAAACGGCTTGTACATGAAACTCAGCCCACGGCAGAGATAG	1623	0.4295	MPCSLGLLSSPVFPPQKTSSLILKSYPLHRLSVNSSIDKNSTTNSSSSNNKSSSWVSPDWLTSLTRSLTSGKDDSGIPAASAKLDDVSDLLGGALFLPLFKWMNEYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYATYAKGLVSEVSEFLFGSGFAIAEGALWTVRRRAVVPSLHKRYLSVMVDRVFCTCAERLVEKLQYDALNGIPVNMEEKFSQLTLDVIGLSVFNYNFDSLNADSPVIEAVYTALKEAEARSTDILPYWKVNVLCKIIPRQIKAEKAVNIIRKTVEELIVKCKEIVEAEGERIDGSDEYVNDSDPSILRFLLASREEVSSLQLRDDLLSLLVAGHETTGSVLTWTLYLLSKNSSSLGKAQEEVDRVLQGRRPTYEDIKDLKFLTRCIIESLRLYPHPPVLLRRAQVPDMLPGDYKVDAGQDIMISVYNIHHSSEVWERAEEFLPERFDLDRPVPNETNTDFRFIPFSGGPRKCVGDQFALLEATVALAIFLQHMNFELVPDQNISMTTGATIHTTNGLYMKLSPRQR	540

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci3g2945	540	Pfam	Cytochrome P450	99	522	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Prci3g2945	540	Gene3D	Cytochrome P450	78	540	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Prci3g2945	540	MobiDBLite	consensus disorder prediction	37	56	-	-
	Prci3g2945	540	SUPERFAMILY	Cytochrome P450	93	538	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Prci3g2945	540	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	479	488	IPR017972	GO:0005506\|GO:0016705
	Prci3g2945	540	PRINTS	P450 superfamily signature	477	486	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Prci3g2945	540	PRINTS	P450 superfamily signature	486	497	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Prci3g2945	540	PRINTS	P450 superfamily signature	398	409	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Prci3g2945	540	PRINTS	P450 superfamily signature	346	363	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Prci3g2945	540	PRINTS	E-class P450 group I signature	438	462	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Showing 1 to 10 of 18 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci3g2945	Prci-Chr3	41072132	41077029	Transposed

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci3g2945	22	538	Cytochrome P450	AT3G53130	80.038	0.0	862

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci3g2945	K09837		-	qsa:O6P43_006591	889.026

Showing 1 to 1 of 1 entries