Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2943 ATGTTGGTCCCTCCATGGCTCGAACCGCTCCTGAACGCTTCGTTTTTCAGCGTTTGCCGGATTCACGGAGACGCCGCCAGGAGCGAGTGTAACATGTATTGTCTGGATTGCAATGGCGACCCGTTTTGCTTTTACTGCCGTTCCTCAAGGCACAAGGATCATCAAGTTATTCAGATAAGAAGATCTTCGTATCACGATGTAGTGAGAGTTGCAGAAATCCAGAAGGTACTGGATATAAGTGGAGTACAGACGTATGTGATAAACAGTGCACGAGTGCTGTTTCTGAACGAAAGGCCTCAGCCAAAATCATCATCTGGGAAAGGAGGAGGAGCTCACATTTGCGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGTTTTTGTTCTTTGGGATGTAAGGTCAGCCATCTCTCTCTCTCGCCTCACAAATGTTTTCATATATATCACTGTCAACATGCACATCATTTACAACTCAACCATGCTTTCCCTCATATGCCTCTAACACCCACCACCCACGCATCTTCACCTACATTGCCAAACCCATCACCATCACATTTTCCCCATCATCATTATATATATTCCCACCACTATTCATCATCATTTCCATCCCTCTAG 615 0.4553 MLVPPWLEPLLNASFFSVCRIHGDAARSECNMYCLDCNGDPFCFYCRSSRHKDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQPKSSSGKGGGAHICEICGRSLLDPFRFCSLGCKVSHLSLSPHKCFHIYHCQHAHHLQLNHAFPHMPLTPTTHASSPTLPNPSPSHFPHHHYIYSHHYSSSFPSL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2943 204 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 140 - -
Prci3g2943 204 SUPERFAMILY B-box zinc-binding domain 18 61 - -
Prci3g2943 204 Gene3D Classic Zinc Finger 15 78 - -
Prci3g2943 204 Pfam PLATZ transcription factor 60 134 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2943 Prci-Chr3 41043790 41045207 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Prci3g2943 PLATZ 2.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2943 - - pcin:129306551 381.333