Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2942 ATGTTGGTCCCTCCATGGCTCGAACCGCTCCTGAACGCTTCGTTTTTCAGCGTTTGCCGGATTCACGGAGACGCCGCCAGGAGCGAGTGTAACATGTATTGTCTGGATTGCAATGGCGACCCGTTTTGCTTTTACTGCCGTTCCTCAAGGCACAAGGATCATCAAGTTATTCAGATAAGAAGATCTTCGTATCACGATGTAGTGAGAGTTGCAGAAATCCAGAAGGTACTGGATATAAGTGGAGTACAGACGTATGTGATAAACAGTGCACGAGTGCTGTTTCTGAACGAAAGGCCTCAGCCAAAATCATCATCTGGGAAAGGAGGAGGAGCTCACATTTGCGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGTTTTTGTTCTTTGGGATGTAAGCTTGTAGGAATAAAGAGAAATGGGAATGCGAGCTTTGGTTTGGACGAGGCATTGTCAAAAGGATCGGTGTCTTCCAGACGAGAAGAAGAATTGCGTGAAGGGTCACAGCAAGATATGTACCCGGCCACGCCTCCTCCTCCACCGGCTTCATCTGCAAGAAGAAGAAAAGGCGTCCCTCATAGGGCTCCTTTTGCCTCCTAA 600 0.4817 MLVPPWLEPLLNASFFSVCRIHGDAARSECNMYCLDCNGDPFCFYCRSSRHKDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQPKSSSGKGGGAHICEICGRSLLDPFRFCSLGCKLVGIKRNGNASFGLDEALSKGSVSSRREEELREGSQQDMYPATPPPPPASSARRRKGVPHRAPFAS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2942 199 MobiDBLite consensus disorder prediction 154 168 - -
Prci3g2942 199 Gene3D Classic Zinc Finger 17 62 - -
Prci3g2942 199 Pfam PLATZ transcription factor 60 134 IPR006734 -
Prci3g2942 199 SUPERFAMILY B-box zinc-binding domain 18 61 - -
Prci3g2942 199 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 197 - -
Prci3g2942 199 MobiDBLite consensus disorder prediction 151 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2942 Prci-Chr3 41043790 41045953 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Prci3g2942 PLATZ 3.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2942 - - gmx:100809455 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2877 1 47492523 47497146 Prci3g2942 3 41043790 41045953 CCT