Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2926 ATGGGAGATAAGCACGAAGAGAATCGGACTGAGAGCAGCGATTTCACTTCAGAGGATGAAGGCACCGAGGACTATCGACGGGGAGGTTACCACGCTGTGCGAATCGGCGATACCTTCAAGAATGGTCGCTATGTTGTTCAGAGCAAGCTCGGCTGGGGGCATTTCTCCACCGTCTGGCTCGCCTGGGACATCCAACTTTCTAGATACGTGGCTCTGAAAGTTCAAAAGAGCGCTCAGCATTACACGGAGGCTGCCATGGACGAGATAACCATTTTACAACAGATTGCAGATGGAGACCCAGAAGATAAGAAGTGTGTGGTGAAGCTTTTGGATCATTTCAAGCATTCAGGTCCCAATGGACAACATGTTTGTATGGTATTTGAATACCTTGGGGATAATCTTTTAACTCTTATCAAGTATACTGATTACCGAGGATTGCCAATGAACATGGTTAGAGAGATATGCTTTCATATTTTGGTTGGATTGGATTACTTACATAAGCAGCTTTCTATAATACATACTGACTTGAAGCCTGAGAACATCCTCTTGTTATCAATGATAGATCCATCCAAGGATCCTAGAAAGTCTGGTGCTCCCTTAATTCTACCAAATGCTAAAGATAAAACAGCACTTGAATCGGTGATTGGGAAAGAAATGAAAGCATTAAATGGGGATTTAATACAGAATCATAAGAAAAAGATTAAAAGAAAAGCTAAGAAGGCGGCTCAGGGATGTGTAGAGAAGGAAGCTTCTGAGGAAGTTGAGGGGGATCCTGAAACATCTGGTGCTGTAGAATCATCTGCCAATGCAATATTAAATGCAGGTTCCGCAGGAGAACAACCTTCTAGTCCTGCAGGCACCAAGAGGTTATCAGATGATGACGGGACCAAGGTAACCTGGTCAAAAAACCAGGGTAACAAAAGAGGAAGCCGTTCATTGAGGCAGAAGTTACTGAAATCGGTTGACCTTAACTGCAAATTAGTTGACTTTGGCAATGCTTGTTGGACATATAAGCAGTTTACAAATGATATTCAGACAAGACAATATAGGTGCCCAGAGGTGATCCTTGGATCAAAGTATTCTACGTCAGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGTGATGTACTATTTGATCCTCATAGTGGTGACAATTTTGATAGAGATGAGGATCACTTAGCACTAATGATGGAACTTCTGGGCATGATGCCTCGGAAGATTGCACTAGGGGGCCGTTACTCCCGAGATTTTTTCAATAGATATGGTGATCTGAGGCACATCCGTCGATTGCGATTTTGGCCCTTGAGCAAAGTTCTCTTGGAGAAATATGATTTCAATGAGCAAGATGCCAATGGCATGGCTGACTTTTTGGTTCCTATTCTCGACTTTGTTCCTGAGAAACGACCAACAGCTGGTCAGTGCCTTCTGCATCCATGGATGAATGCTGGTCCTTGCCTCTTGGAGCCGTCAGTGCCATCTTCTAATCACAATTCAGCTGCGGATGGTGCTGCTATTTCTGACCAAAAGAAGAAGGACAAGGACGAGAGAGAGGCCATGGAGGCGGATGGGAATATTGCCATCAATTCAGACTCTAAACCGCACACAGATTTATTGGCGAAAGCCTGTCAAAGCAGTCAGAAGTAG 1659 0.44 MGDKHEENRTESSDFTSEDEGTEDYRRGGYHAVRIGDTFKNGRYVVQSKLGWGHFSTVWLAWDIQLSRYVALKVQKSAQHYTEAAMDEITILQQIADGDPEDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGLPMNMVREICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGAPLILPNAKDKTALESVIGKEMKALNGDLIQNHKKKIKRKAKKAAQGCVEKEASEEVEGDPETSGAVESSANAILNAGSAGEQPSSPAGTKRLSDDDGTKVTWSKNQGNKRGSRSLRQKLLKSVDLNCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLSKVLLEKYDFNEQDANGMADFLVPILDFVPEKRPTAGQCLLHPWMNAGPCLLEPSVPSSNHNSAADGAAISDQKKKDKDEREAMEAGXGNIAINSDSKPHTDLLAKACQSSQK 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2926 553 Pfam Protein kinase domain 321 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2926 553 Pfam Protein kinase domain 44 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2926 553 MobiDBLite consensus disorder prediction 492 553 - -
Prci3g2926 553 ProSiteProfiles Protein kinase domain profile. 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2926 553 SMART serkin_6 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2926 553 MobiDBLite consensus disorder prediction 1 23 - -
Prci3g2926 553 FunFam CMGC/SRPK protein kinase 30 129 - -
Prci3g2926 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Prci3g2926 553 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 9 514 - -
Prci3g2926 553 MobiDBLite consensus disorder prediction 510 525 - -
Prci3g2926 553 Gene3D Transferase(Phosphotransferase) domain 1 127 486 - -
Prci3g2926 553 FunFam Serine/threonine-protein kinase SRPK-like protein 315 485 - -
Prci3g2926 553 CDD STKc_SRPK 33 485 - -
Prci3g2926 553 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Prci3g2926 553 MobiDBLite consensus disorder prediction 248 308 - -
Prci3g2926 553 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Prci3g2926 553 SUPERFAMILY Protein kinase-like (PK-like) 39 497 IPR011009 -
Prci3g2926 553 MobiDBLite consensus disorder prediction 262 289 - -
Prci3g2926 553 MobiDBLite consensus disorder prediction 493 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2926 Prci-Chr3 40910521 40915251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2926 1 538 EF-hand Containing Proteins AT5G22840 68.066 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Prci3g2926 Pkinase 4.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2926 K08832 - gmx:100803070 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g2926 3 40910521 40915251 Prci3g2926 3 40910521 40915251 ECH