Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2918 ATGAACAAGGCTTATCCTCTAAGCATTGCATTGGCCTTGGCCTTCACATTAGTTTGCTGTGTCACACAATCTCTGGGTTTAACCCAAAATGACACCCACGCTCTCACCCAATTCCGCTTCCAGGCTGATGCCCATGGCTATCTTCTCGCCAACTGGACCGGCGCCGACGCCTGCGCTGCTTTCTGGCGCGGCATTCAGTGTTCCCCTAAAGGCCATGTCGTCGGCGTCTCGCTTCCTTCTCTTAATCTCCGAGGCCCTGTTGATTCTCTGTCTTCGTTAGGCTACTTGCGCCTCCTTGACCTCCATGATAATCGCTTAAATGGCAGCGTTGCGCCTCTCTCTAACTGCACGAGTCTTGAACTTCTTTATCTCTCCGGGAATGACTTCTCCGGCGGGATACCGGCGGAGATAGCGTCGCTCACGCGTCTACTCAGGCTTGACCTCTCTGACAACAACATCCGAGGTCCCATTCCTAAGGAACTGTCCAAATTGACCGCGCTTCTCACGCTCAGGCTACAGAATAATGAGCTCTCTGGGAAAATCCCTGATTTTTCTGCCTCTCTGCTCAAACTCAAGGAGCTCAACATGACCAACAACGAGTTTTATGGAAGCTTACCTGATGGAATGTTGAAGAAATTCGGCGACGTAAGTTTCTCTGGGAATAAAGGCTTATGTGGATCAAGCCCATTGCCGGTATGTTCCGCCACAACAGAGAATCTGCCATCTTCTTCAGCATCGGCTCCGACAGTTCCTTCTAAGCCAACCCCGTTTCCCCAAACAAGCGCAACTCCTCCTCCCAAAAACCAACCCCGAAAGGGGTTAAGCACCGGAGCTATCGTAGCCATTGTGGTGGCGAATTGTGTGGCATTGCTGGTATTGACCTCTTTCATCGTTGCCCATTGCTGCGCCAGAGGACGAACCTCCGATTCTGTGGTTGGCAGTGAGATTGGGAAGAGGAAAAGCGGGAGTAGCTATGGAAGCGAGAAGAAGGTTTACGCGAGTGGGTGTGTAGACAGTGATGGAACTAGCGGGACAGACCAAAGCAGGCTTGTATTCTTTGACAGAAGGAGTCAATTCGAGCTGGAAGATCTGCTCCGAGCATCGGCGGAGATGCTGGGAAAAGGAAGCTTGGGCACAGTGTACAAGGCAGTGCTCGACGATGGGTGTACCGTGGCCGTGAAGAGACTCAAAGATGCCAACCCATGCTCTCGGAAGGAGTTCGAGCAGTACATGGATGTGATTGGAAAGCTCAAGCACCCCAATATCGTGAGACTCAGAGCCTATTACTATGCCCGAGAAGAAAAGCTCCTCGTCTATGATTATCTTCCCAACGGAAGCTTGCATTCTCTTCTTCACGGGAACCGTGGTCCTGGAAGAATCCCATTGGATTGGACGACAAGAATAAGCTTGGTTTTAGGGGCAGCCAGAGGACTCGCTCGGATTCATGCTGAATACAGTGCAGCAAAAATACCTCACGGCAACATCAAATCTTCCAATGTTGTACTCGACAGGAATGGCGTTGCTTGCATCTCTGACTTTGGCCTGTCTCTGCTTCTGAACCCTGTCCATGCAATCGCAAGATTGGGTGGATACAGATCTCCCGAGCAAGAAGAAAGCAAGAAGCTGTCTCAGCAGGCAGACGTGTACAGCTTTGGCGTCTTGCTGTTGGAAGTTCTGACTGGGAAAACCCCGTCCCAGGAGCCTTCACCGACACGTCCTAGGTTGGTTGAAGATGCACAAACCGTGGATCTCCCCAAATGGGTTCGATCTGTAGTGAAGGAAGAATGGACAGCGGAAGTGTTCGATCAAGAACTGTTGAGGTACAAGAACATTGAGGAAGAGCTCGTGTCCATGCTACACGTGGGTTTGTCGTGTGTGGTGACGGAGGCAGAGAAGAGGCCAACCATGGCGGAAGTTGTTAAGTTGATTGAGGACATCAGGGTGGAGCAATCTCCTCTAGGCGAAGACTATGATGAGTCTCGCAATTCGCTTTCACCTTCCCTTCCGACCACTGAAGATGGACTAGCTTAA 2031 0.5111 MNKAYPLSIALALAFTLVCCVTQSLGLTQNDTHALTQFRFQADAHGYLLANWTGADACAAFWRGIQCSPKGHVVGVSLPSLNLRGPVDSLSSLGYLRLLDLHDNRLNGSVAPLSNCTSLELLYLSGNDFSGGIPAEIASLTRLLRLDLSDNNIRGPIPKELSKLTALLTLRLQNNELSGKIPDFSASLLKLKELNMTNNEFYGSLPDGMLKKFGDVSFSGNKGLCGSSPLPVCSATTENLPSSSASAPTVPSKPTPFPQTSATPPPKNQPRKGLSTGAIVAIVVANCVALLVLTSFIVAHCCARGRTSDSVVGSEIGKRKSGSSYGSEKKVYASGCVDSDGTSGTDQSRLVFFDRRSQFELEDLLRASAEMLGKGSLGTVYKAVLDDGCTVAVKRLKDANPCSRKEFEQYMDVIGKLKHPNIVRLRAYYYAREEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSAAKIPHGNIKSSNVVLDRNGVACISDFGLSLLLNPVHAIARLGGYRSPEQEESKKLSQQADVYSFGVLLLEVLTGKTPSQEPSPTRPRLVEDAQTVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLSCVVTEAEKRPTMAEVVKLIEDIRVEQSPLGEDYDESRNSLSPSLPTTEDGLA 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2918 676 Gene3D Ribonuclease Inhibitor 28 241 IPR032675 -
Prci3g2918 676 FunFam Nuclear pore complex protein NUP107 28 183 - -
Prci3g2918 676 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 648 IPR046959 -
Prci3g2918 676 MobiDBLite consensus disorder prediction 237 272 - -
Prci3g2918 676 MobiDBLite consensus disorder prediction 251 265 - -
Prci3g2918 676 FunFam pollen receptor-like kinase 1 337 441 - -
Prci3g2918 676 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 442 655 - -
Prci3g2918 676 Pfam Protein kinase domain 370 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2918 676 MobiDBLite consensus disorder prediction 652 676 - -
Prci3g2918 676 SUPERFAMILY Protein kinase-like (PK-like) 370 643 IPR011009 -
Prci3g2918 676 SUPERFAMILY L domain-like 30 226 - -
Prci3g2918 676 ProSiteProfiles Protein kinase domain profile. 366 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2918 676 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Prci3g2918 676 CDD STKc_IRAK 372 646 - -
Prci3g2918 676 Gene3D Phosphorylase Kinase; domain 1 337 441 - -
Prci3g2918 676 Gene3D Transferase(Phosphotransferase) domain 1 442 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2918 Prci-Chr3 40854699 40857462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2918 24 672 Receptor kinase-like Gene Family AT2G36570 67.265 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci3g2918 Pkinase 3.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2918 - - qsa:O6P43_009504 1024.62