Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2913 ATGGAAGAAAAAGATGTCCATGTTTTCGGGTCAACTGGGAACTCAGATTCCGGGCAGCCCCTGCAACCCATCGGAGCCTCCCTGTCTCAGGTAACGAACATGGCGGTTAACATGAACTTGCAGAATAGTGGAGGGGCAACAGTTGGAGACGCAGCGACAATGGCATCGCCTGCAACTACCGGAGGAGGAGGGCAAGGGAGTTTCGATTTGTTCGGGAAAAAGAAGCGAGGGAGGCCGAGAAAATATGATTCAGATGGGAAGCCGAGGCTGACGACATCGTACCAGGGTGCACAATCACAACAAGGCTTTTCTTTGTCCCCAACTTCACCTTCTGAATTTTCCTCCAAAAGGGGTCGAGGAAGACCACCTGGCTCCGGGAACTGGAAGCTCCTCGCATCTTTAGGTGAGTTGTTTGCAAACACAGCAGGTGGGGATTTTACACCTCACGTCGTCACTGTTCATACTGGAGAGGATGTCGCCGGAAAAATCCTGTCATTTGCCCAGAAGGGTCCCAGAGGAGTTTGCGTTCTTTCTGCCAATGGAGCTATATCTAATGTCACTCTACGGCAGCCTGGTTCTTCCGGTGGCTTATTAACATACGAGGGTCGGTTCGAGATTTTATCTTTGTCAGGGTCATTCACAGTGTCTGATAATGGGGGCATAAGAAGTCGAACTGGTGGATTGAGTGTCTCGCTGGCTGGCCCTGACGGTCGTGTCATAGGCGGTGGTGTTGCTGGTTTATTGACTGCTGCTAGCCCAATCCAAATTGTGATGGGAAGCTTCTTGGCGGGGCATGGTCACAAGGCGCAGAAAAGAAAGCAAAATCGTGAGAACACTGTGGCATCTCCAGTTTCTGGTGCAGACTCTGTGATGGCAGCGAGACCTATCTCACAGGCGAATCCCGACGGTGGTGAAAACTGTTTCATTCCCATGGCCCAGCAGCAGCTTCCAGAACAAAGCCACAGAGAATCAGACAACATCACGAGCAGCGATAAACAGAGTTTAGATGCCACACCCAATGCTTGTGATTGGAATGGATTTGAGGAGTTATCTGATCAGGGGCCAACCCCAGACATCAATATTTCTTTGCCTGGGGAATAG 1101 0.5077 MEEKDVHVFGSTGNSDSGQPLQPIGASLSQVTNMAVNMNLQNSGGATVGDAATMASPATTGGGGQGSFDLFGKKKRGRPRKYDSDGKPRLTTSYQGAQSQQGFSLSPTSPSEFSSKRGRGRPPGSGNWKLLASLGELFANTAGGDFTPHVVTVHTGEDVAGKILSFAQKGPRGVCVLSANGAISNVTLRQPGSSGGLLTYEGRFEILSLSGSFTVSDNGGIRSRTGGLSVSLAGPDGRVIGGGVAGLLTAASPIQIVMGSFLAGHGHKAQKRKQNRENTVASPVSGADSVMAARPISQANPDGGENCFIPMAQQQLPEQSHRESDNITSSDKQSLDATPNACDWNGFEELSDQGPTPDINISLPGE 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2913 366 MobiDBLite consensus disorder prediction 44 126 - -
Prci3g2913 366 SUPERFAMILY AF0104/ALDC/Ptd012-like 145 269 - -
Prci3g2913 366 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 49 324 IPR039605 GO:0003680
Prci3g2913 366 MobiDBLite consensus disorder prediction 10 26 - -
Prci3g2913 366 MobiDBLite consensus disorder prediction 71 87 - -
Prci3g2913 366 MobiDBLite consensus disorder prediction 1 26 - -
Prci3g2913 366 MobiDBLite consensus disorder prediction 267 290 - -
Prci3g2913 366 CDD DUF296 147 261 IPR005175 -
Prci3g2913 366 Gene3D - 148 280 - -
Prci3g2913 366 ProSiteProfiles PPC domain profile profile. 143 283 IPR005175 -
Prci3g2913 366 MobiDBLite consensus disorder prediction 316 366 - -
Prci3g2913 366 MobiDBLite consensus disorder prediction 88 115 - -
Prci3g2913 366 SMART AT_hook_2 73 85 IPR017956 GO:0003677
Prci3g2913 366 SMART AT_hook_2 116 128 IPR017956 GO:0003677
Prci3g2913 366 Pfam Plants and Prokaryotes Conserved (PCC) domain 148 261 IPR005175 -
Prci3g2913 366 FunFam AT-hook motif nuclear-localized protein 1-like 148 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2913 Prci-Chr3 40807057 40810437 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2913 73 299 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.170 1.12e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2913 - - qsa:O6P43_009509 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g2913 3 40807057 40810437 Prci3g2913 3 40807057 40810437 ECH