Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2909 ATGGAAATGCCTGCCAAGAGATCCAACTACACCCTCCTGAACCAAATTCCTGATGAAGAGTTCGGTGGCGATGCAGCCTTGTCCGCAGCTACTACTGGTCCCACTTCTTTATTTGATTCTTCATCGGGGGACGGCAAGAACAATAAAGGCAAGCTTGACAGAGGATATGATTGGGATTCGGTTGCTGATCAGAGGGTCCCTCAGCAGGGGAATCGGATCGGTAATTTATACTCATCGATCGGGTTGCAGAGGCAGTCTAGTGGTAGCAGTTTTGGTGAAAGCTCGCTATCCGGAGAGTATTATGCTCCGACTCTGTCCGCGACGGCTGTGAATGAGATCGATACCTTTGGTTATATGCATGACGATGGTTTCAAGGTTGGCAGTGGTGCTGGTGTTGGAGGCGAGCTACGGAACAAGTTAGTGGAGACTACGGTGAGTATGGGAGGGTTGTCGTTGGGTAAAAGCTGGGCGCAGCAGACGGAGGAAAGTTATCAATTGCAGCAGGCTTTGGCACTTAGGCTCTCATCCGAGGCAACATGCGCTGATGATCCGAATTTTCTGGATCCATTACCAGATGAATCTACTTTAAGGTTGTCATCGTCAAATTCGGCAGAGGCAGTGTCACATCGATTCTGGGTCAATGGCTGCCTATCTTACTCCGACAAGATTCCAGATGGCTTCTACCTTGTCCATGGGATGGATCCTTACGTGTGGACTGTGTGTACTGATCTACAGGAAAATGGCCGAATACCATCAGTTGAATCGCTAAAGTCTGTAGATCCCTGCAATGATTCTTCACTTGAAGTAGTTTTGGTGGATCAACGTAGTGATCCTAGCTTAAAGGAGCTGCAAAACAGAGTACGTAGCATTTCTTGTAGCTGCATAACCACAACAGAGGTTGTAGACCATCTTGCCAAGTTGGTTTGCAACCGTATGGGGGGTTCAGCTTCTGTTGGGGAAGATGACTTTATTTTCATCTGGAGGGCGTGCAGTAATGATCTTAAAGATTGCTTGGGATCTGTTGTTGTTCCTTTAAGTAGTCTGTCTGTTGGCCTCTGCAGGCATCGTGCTGTACTGTTCAAAGTGCTAGCTGACTCCATTGATTTGCCCTGTCGAATTGCTAAAGGCTGTAAATATTTCAGAGATGATGCTTCCTCTTGTCTTGTCCAATTTGGGTTTGAAAGGGAATATCTGGTTGATTTAATTGGGAAGCCAGGTTATTTATGCGAGCCTGATTCCTTGCTCAATGGTCCATCCTCCATCTCATTTTCTTCACCCTTGAGCTTTCCAAGACTTAAACCAGCTGAACCTACCATTGATTTCAGGTCATTGGCCAAAGAGTATTTTTCAGATTGTGTGTCTCTTGAGCTTGTCTTTGACAATGATTCTGCAGAACAGTTTAATGGGAAGGGCAGAGGCGGAAATAATGTTAGGTCAAATTCAAATGATAGCAACAAAACTCCTTGCCAGTCTCTGCATTCAGAAGTTTCTCATTTGAGAACTCATGATCAGAGTTCTGAAACATTTGCATCATGCAACTCTCCTCAGAATGTAGATTCTACACCCATGGGCAAGGATCTACTGCCTACTCCTATAACACTGACAAATTCAAATGTTGATGCTACCGAGTGTAGGAGTTTTGCTGAAGGAAGTCAACTGTTTGTTAGCAAAACCTGTAGGGAGCTTGGCCTTGATATGGAGGATCTTGACATACCTTGGAGTGATCTTGTTTTAAAAGAGAGAATAGGATCGGGTTCCTTTGGAACAGTACATCGAGCTGAGTGGAATGGCTCGGATGTTGCTGTTAAAATTTTAATGGAACAAGATTTTCATGCTGAAAGATTCAAGGAGTTTCTGAGAGAGGTTGCAATAATGAAACGCTTGCGGCATCCAAATATTGTTTTATTTATGGGTGCAGTTACTCAGCCTCCGAACTTATCAATTGTCACGGAATATTTATCTAGGGGTAGCTTATACAGGCTGTTACACAAACCTGGTGCCAGAGAGATGTTGGATGAGAGACGTAGATTGAGCATGGCTTATGATGTGGCAAAAGGAATGAATTATCTTCACAAACGCAATCCTCCCATTGTTCATAGAGATCTAAAGTCTCCAAACCTTCTTGTAGACAAGAAATATACTGTGAAGGTTTGTGATTTTGGCCTTTCACGTCTCAAGGCAAATACATTTCTTTCATCCAAGTCTGCTGCGGGGACTCCTGAGTGGATGGCCCCAGAAGTTCTACGAGATGAGCCATCCAATGAGAAGTCAGATGTTTACAGTTTTGGTGTAATCTTGTGGGAGCTAACAACATTGCAACAGCCGTGGAGTAATTTGAATCCTGCACAGGTTGTGGCAGCCGTTGGCTTTAAGGGCAAAAGGCCTGAGATTCCACGTGATTTGAATCCCCAAGTAACTGCAATAATTGAGGCTTGCTGGGCCAGCGAGCCCTGGAAACGTCCTGCTTTTTCAAGTATAATGGATTCTTTAAGATCATTGATCAAACCTCCTGCACCTCAACCTGCGCGTCCAAACATGCCCTTACTTACCTGA 2553 0.4473 MEMPAKRSNYTLLNQIPDEEFGGDAALSAATTGPTSLFDSSSGDGKNNKGKLDRGYDWDSVADQRVPQQGNRIGNLYSSIGLQRQSSGSSFGESSLSGEYYAPTLSATAVNEIDTFGYMHDDGFKVGSGAGVGGELRNKLVETTVSMGGLSLGKSWAQQTEESYQLQQALALRLSSEATCADDPNFLDPLPDESTLRLSSSNSAEAVSHRFWVNGCLSYSDKIPDGFYLVHGMDPYVWTVCTDLQENGRIPSVESLKSVDPCNDSSLEVVLVDQRSDPSLKELQNRVRSISCSCITTTEVVDHLAKLVCNRMGGSASVGEDDFIFIWRACSNDLKDCLGSVVVPLSSLSVGLCRHRAVLFKVLADSIDLPCRIAKGCKYCXRDDASSCLVQFGFEREYLVDLIGKPGYLCEPDSLLNGPSSISFSSPLSFPRLKPAEPTIDFRSLAKEYFSDCVSLELVFDNDSAEQFNGKGRGGNNVRSNSNDSNKTPCQSLHSEVSHLRTHDQSSETFASCNSPQNVDSTPMGKDLLPTPITLTNSNVDATECRSFAEGSQLFVSKTCRELGLDMEDLDIPWSDLVLKERIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAREMLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELTTLQQPWSNLNPAQVVAAVGFKGKRPEIPRDLNPQVTAIIEACWASEPWKRPAFSSIMDSLRSLIKPPAPQPARPNMPLLT 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2909 851 CDD STKc_MAP3K-like 583 831 - -
Prci3g2909 851 MobiDBLite consensus disorder prediction 21 55 - -
Prci3g2909 851 FunFam Serine/threonine-protein kinase CTR1 656 841 - -
Prci3g2909 851 Gene3D Phosphorylase Kinase; domain 1 570 655 - -
Prci3g2909 851 FunFam Serine/threonine-protein kinase isoform 1 567 655 - -
Prci3g2909 851 Pfam Ethylene-responsive protein kinase Le-CTR1 204 410 - -
Prci3g2909 851 Pfam Protein tyrosine and serine/threonine kinase 578 831 IPR001245 GO:0004672|GO:0006468
Prci3g2909 851 MobiDBLite consensus disorder prediction 469 496 - -
Prci3g2909 851 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 201 834 - -
Prci3g2909 851 SMART serkin_6 577 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2909 851 MobiDBLite consensus disorder prediction 29 45 - -
Prci3g2909 851 ProSitePatterns Protein kinases ATP-binding region signature. 583 604 IPR017441 GO:0005524
Prci3g2909 851 MobiDBLite consensus disorder prediction 504 524 - -
Prci3g2909 851 PRINTS Tyrosine kinase catalytic domain signature 739 749 IPR001245 GO:0004672|GO:0006468
Prci3g2909 851 PRINTS Tyrosine kinase catalytic domain signature 758 780 IPR001245 GO:0004672|GO:0006468
Prci3g2909 851 PRINTS Tyrosine kinase catalytic domain signature 651 664 IPR001245 GO:0004672|GO:0006468
Prci3g2909 851 PRINTS Tyrosine kinase catalytic domain signature 692 710 IPR001245 GO:0004672|GO:0006468
Prci3g2909 851 PRINTS Tyrosine kinase catalytic domain signature 802 824 IPR001245 GO:0004672|GO:0006468
Prci3g2909 851 MobiDBLite consensus disorder prediction 469 530 - -
Prci3g2909 851 ProSiteProfiles Protein kinase domain profile. 577 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2909 851 Gene3D Transferase(Phosphotransferase) domain 1 656 841 - -
Prci3g2909 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Prci3g2909 851 SUPERFAMILY Protein kinase-like (PK-like) 564 830 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2909 Prci-Chr3 40776537 40784055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2909 1 847 MAP Kinase Kinase Kinase AT5G03730 65.553 0.0 1008
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci3g2909 PK_Tyr_Ser-Thr 1.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2909 K14510 - qsa:O6P43_005884 1264.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g0235 1 2217202 2230808 Prci3g2909 3 40776537 40784055 CCT