Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2908 ATGGAAATGGAGGATCATCACCATCATCATCAACAGCAGCAACAGCATCTCGAGTATGATTCTATGGGGGATCTCAGGCACCTCGTGAATGCACCGCGGTCGTCACTCTCAGCGGACCTCTTCCCGCCCCACTCGAATTTCACACCCGCTCACCACTATGATTCCATGGCCTTCGCTCGTCATCAACTGATGGCTGATATCATGCCTCGTGGCCTTCACCATCCTACTGTTCTTAATACTAGCATTTCTGCGGCCACTCCAACCGCCGTCACTGCCACTACTCCAACGCTTAGCGCCTTTGACGCTGATGCTTCGGGTTGTTTCCCAGGAGACTCCTCCACGGCTCGGTGGCCCAGACAGGAAACTCTTACACTTCTCGAGATCAGATCTCGTCTTGACTCCAAGTTCAGACACGCCAATCAGAAGGGCCCCTTATGGGATGAACTTTCTAGAATCATGTCCGAAGAATATGGATATCAAAGGAGCGGCAAAAAATGCAGGGAAAAATTCGAGAACTTGTATAAATATTACAAGAAAACAAAGGAAGGTAAGGCAGGAAGACAAGATGGGAAGCATTACAGATTCTTTCGTCAACTTGAAGCTTTATACGGAGAAAACACCAACCCAACCTCAGTCCAAGAAACCAATTTTGGTAGCAGCAGTCTTCACTTTCAGACCCCTTCCCAGACAAATCAAGACATTTTTAATAGACACTGTGATAGCGTCAGCCTCACTAATAACTCCGCTGAGCTGGACACATCATCATCGGATGAAAATGATTCAATGGAGAAGAGGAGAAAGAGAGGAGGAAGAAACTGGAAAGCAAAGATAAAAGAGTTGATAGACTCAGAGATGAAGAAGGTGATGGAGAAACAAGAGGCATGGTTGGAGAGATTAATGAAGACATTGGAAGAGAAGGAAAAGGAGAGGGCGCTGAGAGAGGAAGAATGGAGCAGACAAGAAGCAGCCAGGTTAGACAAGGAGCATAAGTTTTGGGCTAAAGAAAGGGCATGGGTTGAATCCAGAGACGCCGCTTTAATGGAGGCGTTGCAAAAATTAACAGGAAGAGAAATAAAGGCTGGTGATCCACATACTGCTGATATTCAAAATTACAGCGAAAACCAGAATGAAGATGGAAGTGAAATACTGCATAGCACCGACAGAGTTGGTGAAAGTTGGACAGAATCTGAGATCACTACTCTCGTTCAGATGAGAGCTGAGGTGGAATCCAGGTTTGGGCAAAGTGAGTGCCCGGAGGAGGTTCTTTGGGAGGAAGTTGCAAACAAAATGGCTTGTTTTGGCTGCCATAAGGCTGCTTCAGTGTGCAAAGACAAATGGGAAAACATCAGAAGCTATCACAAGAAGCGCAAGCAAAATTCAACTAGTTTTTACTTGGAAACCAATAATCAGTCACCCTTGTATAATCAAGCAAGCGCTTATTGTGATGTCGCCCAACAGCGGACGGATGGTTCTTCACCTTCAAATTCTAATGTTGGAAATGCTGCTAGAGCCGATAGTTGTTTTCCTTTGTTTATGTGTGAAGGAGAAAGTATGTGGGAAAATTACGGCTTAAAGCTCAACAAAGGAAACCAAAACCCGTGA 1602 0.4544 MEMEDHHHHHQQQQQHLEYDSMGDLRHLVNAPRSSLSADLFPPHSNFTPAHHYDSMAFARHQLMADIMPRGLHHPTVLNTSISAATPTAVTATTPTLSAFDADASGCFPGDSSTARWPRQETLTLLEIRSRLDSKFRHANQKGPLWDELSRIMSEEYGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENTNPTSVQETNFGSSSLHFQTPSQTNQDIFNRHCDSVSLTNNSAELDTSSSDENDSMEKRRKRGGRNWKAKIKELIDSEMKKVMEKQEAWLERLMKTLEEKEKERALREEEWSRQEAARLDKEHKFWAKERAWVESRDAALMEALQKLTGREIKAGDPHTADIQNYSENQNEDGSEILHSTDRVGESWTESEITTLVQMRAEVESRFGQSECPEEVLWEEVANKMACFGCHKAASVCKDKWENIRSYHKKRKQNSTSFYLETNNQSPLYNQASAYCDVAQQRTDGSSPSNSNVGNAARADSCFPLFMCEGESMWENYGLKLNKGNQNP 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2908 533 FunFam trihelix transcription factor PTL-like 117 179 - -
Prci3g2908 533 CDD GT1 393 457 - -
Prci3g2908 533 ProSiteProfiles Myb-like domain profile. 116 174 IPR001005 -
Prci3g2908 533 Pfam Myb/SANT-like DNA-binding domain 116 202 IPR044822 -
Prci3g2908 533 Pfam Myb/SANT-like DNA-binding domain 392 460 IPR044822 -
Prci3g2908 533 Coils Coil 286 316 - -
Prci3g2908 533 CDD GT1 116 181 - -
Prci3g2908 533 ProSiteProfiles Myb-like domain profile. 385 450 IPR001005 -
Prci3g2908 533 MobiDBLite consensus disorder prediction 246 270 - -
Prci3g2908 533 FunFam Trihelix transcription factor GT-2 393 455 - -
Prci3g2908 533 Gene3D - 117 179 - -
Prci3g2908 533 Gene3D - 393 455 - -
Prci3g2908 533 PANTHER FI21293P1 104 497 - -
Prci3g2908 533 SMART sant 113 176 IPR001005 -
Prci3g2908 533 SMART sant 389 452 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2908 Prci-Chr3 40756328 40759172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2908 61 528 Trihelix Transcription Factor Family AT5G03680 45.794 3.53e-131 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci3g2908 Myb_DNA-bind_4 2.5e-13 CL0123