Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2902 ATGGACTTGTATCTGAATCAATGGAGAGACCAGGATGAGTCAGTGGCAGAGGAGCAACATTCTGCAAAGATGCCAAAACTTGTGCTCCAACCTCATCAAAAGCCACAATCATCTGCCTCTGCTCTCCCTCTGTTTGTACCCGAACCCACCACCAAAGTCAGCACCTTGTCAGCATTACCTGATTCAACCTCAGCTTCTACTAGAGTTCACTGGATGGGGAGTTATTTCAGCTTGGCTCAGTGGCAGGAGCTTGAGTTGCAGGCTTTGATTTTCAGGTACATGTTGGCCGGCGCTGCTGTGCCTCCTGAGCTTCTTCACCCAATCAAGAAAAGCCTTCTTCAATCCCCTTCCTTTTTCCTCCAGCACTATCCGCATTATGACTCAGCTTCGATTGGTTTTGAATGGCAAAGCTACATAATAAGGATGCTTGTTGCAGTAGCATTGCAATCGGGTTATTGGGGAAGGGCAGCCATGGATCCAGAGCCTGGTCGGTGCCGGAGGACAGACGGCAAAAAGTGGCGGTGCTCGAGGGACGTGGTTGCTGGCCAGAAGTATTGCGAGCGCCACATGCATCGCGGTCGAAACCGTTCAAGAAAGGCTGTGGAACTACCCACACCAAAGGCTCCCGGTGGCGGTGGCTCTGGCAGCGGCGGAGCCTCTGTCGGTGCTCCAATACCCATGACTGCGCCGTCATTGGCAACGGCTTCACTGACTTCCCCGTTCGTTCTTCATCTTGATCAAAGGTAA 747 0.5221 MDLYLNQWRDQDESVAEEQHSAKMPKLVLQPHQKPQSSASALPLFVPEPTTKVSTLSALPDSTSASTRVHWMGSYFSLAQWQELELQALIFRYMLAGAAVPPELLHPIKKSLLQSPSFFLQHYPHYDSASIGFEWQSYIIRMLVAVALQSGYWGRAAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKAVELPTPKAPGGGGSGSGGASVGAPIPMTAPSLATASLTSPFVLHLDQR 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2902 248 ProSiteProfiles QLQ domain profile. 75 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci3g2902 248 Pfam QLQ 76 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci3g2902 248 PANTHER GROWTH-REGULATING FACTOR 5 43 212 IPR031137 GO:0005634|GO:0006351|GO:0032502
Prci3g2902 248 ProSiteProfiles WRC domain profile. 159 203 IPR014977 -
Prci3g2902 248 SMART QLQ_2 74 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci3g2902 248 MobiDBLite consensus disorder prediction 191 223 - -
Prci3g2902 248 Pfam WRC 160 202 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2902 Prci-Chr3 40679153 40681956 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2902 1 205 GRF Transcription Factor Family AT2G36400 56.744 9.92e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Prci3g2902 WRC 2.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2902 - - pcin:129307222 490.345