Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2900 ATGGACTTGTATCTGAATCAATGGAGAGACCAGGATGAGTCAGTGGCAGAGGAGCAACATTCTGCAAAGATGCCAAAACTTGTGCTCCAACCTCATCAAAAGCCACAATCATCTGCCTCTGCTCTCCCTCTGTTTGTACCCGAACCCACCACCAAAGTCAGCACCTTGTCAGCATTACCTGATTCAACCTCAGCTTCTACTAGAGTTCACTGGATGGGGAGTTATTTCAGCTTGGCTCAGTGGCAGGAGCTTGAGTTGCAGGCTTTGATTTTCAGGTACATGTTGGCCGGCGCTGCTGTGCCTCCTGAGCTTCTTCACCCAATCAAGAAAAGCCTTCTTCAATCCCCTTCCTTTTTCCTCCAGCACTATCCGCATTATGACTCAGCTTCATTGCAATCGGGTTATTGGGGAAGGGCAGCCATGGATCCAGAGCCTGGTCGGTGCCGGAGGACAGACGGCAAAAAGTGGCGGTGCTCGAGGGACGTGGTTGCTGGCCAGAAGTATTGCGAGCGCCACATGCATCGCGGTCGAAACCGTTCAAGAAAGGCTGTGGAACTACCCACACCAAAGGCTCCCGGTGGCGGTGGCTCTGGCAGCGGCGGAGCCTCTGTCGGTGCTCCAATACCCATGACTGCGCCGTCATTGGCAACGGCTTCACTGACTTCCCCGTTCGTTCTTCATCTTGATCAAAGGTAA 696 0.5316 MDLYLNQWRDQDESVAEEQHSAKMPKLVLQPHQKPQSSASALPLFVPEPTTKVSTLSALPDSTSASTRVHWMGSYFSLAQWQELELQALIFRYMLAGAAVPPELLHPIKKSLLQSPSFFLQHYPHYDSASLQSGYWGRAAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKAVELPTPKAPGGGGSGSGGASVGAPIPMTAPSLATASLTSPFVLHLDQR 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2900 231 ProSiteProfiles QLQ domain profile. 75 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci3g2900 231 Pfam WRC 143 185 IPR014977 -
Prci3g2900 231 Pfam QLQ 76 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci3g2900 231 MobiDBLite consensus disorder prediction 172 210 - -
Prci3g2900 231 SMART QLQ_2 74 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci3g2900 231 ProSiteProfiles WRC domain profile. 142 186 IPR014977 -
Prci3g2900 231 PANTHER GROWTH-REGULATING FACTOR 5 43 196 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2900 Prci-Chr3 40679153 40681956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2900 1 188 GRF Transcription Factor Family AT2G36400 61.111 2.52e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Prci3g2900 WRC 2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2900 - - pcin:129307222 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2935 1 48043938 48046125 Prci3g2900 3 40679153 40681956 CCT
Prci3g2900 3 40679153 40681956 Prci3g2900 3 40679153 40681956 ECH