Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2893 ATGAAGGTGATCGCCGCTTATTTGCTCGCTGTTTTGGGGGGGAACACCAGTCCGTCCTCTGCTGATCTCAAGGGCATACTTGGCTCTGTCGGAGTGGAGGTTGACGATGACAGGATTGAACTTCTTCTGTCCGAAGTCAAGGGTAAAGACATAACAGAGTTGATCGCCAGCGGTAGGGAAAAGTTGGCCTCTGTACCTTGTGGCGATGGTGCTGCAGTTGCAATGGCTGCCGCACCTGGTGGAGCTGCGGCTCCAGCGGCAGCCGAGCCAAAGAAGGAAGAAAAGGTCGAGGAGAAAGAAGAATCCGATGATGACATGGGCTTCAGTCTCTTTGATTAA 339 0.528 MKVIAAYLLAVLGGNTSPSSADLKGILGSVGVEVDDDRIELLLSEVKGKDITELIASGREKLASVPCGDGAAVAMAAAPGGAAAPAAAEPKKEEKVEEKEESDDDMGFSLFD 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2893 112 CDD Ribosomal_P2 1 112 IPR044076 GO:0002182|GO:0003735|GO:0022625
Prci3g2893 112 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 112 IPR044076 GO:0002182|GO:0003735|GO:0022625
Prci3g2893 112 Hamap 50S ribosomal protein L12 [rpl12]. 2 112 IPR027534 GO:0003735|GO:0005840|GO:0006414
Prci3g2893 112 Gene3D - 1 59 IPR038716 -
Prci3g2893 112 FunFam 60S acidic ribosomal protein P2 1 59 - -
Prci3g2893 112 Pfam 60s Acidic ribosomal protein 17 111 - -
Prci3g2893 112 MobiDBLite consensus disorder prediction 82 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2893 Prci-Chr3 40601776 40602832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2893 1 112 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 66.071 3.21e-31 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2893 K02943 - pvy:116129032 144.05