Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2892 ATGAACCAAGCTGTTGAAGGTCATCAGCCACATCAACAAATATCTACAAGTGAACCAAAAAGGATTCAACAGGATGTCTGCTCAGGACAAGTGAAGATGGAGGAGGATGCTGATTTAACTAAGACAAGCATCTTATGCAGAAGTTACTCTTTGGTTGGCTGCAGCAAGTCAAGGCGTAATTTAACTGAGGAAGAAAAGGAGGCACGGAGGATACGCAGGGTATTGGCAAACAGAGAGTCAGCTAGGCAGACAATTCGTCGTAGGCAGGCACTTTGTGAGGAGTTAACCAGAAAAGCTGCCAATTTAGCAGTGGAGAATGAAAACCTGAAGAGGGAGAAGGAGTTGGCTTTGAAAGAGTATCAATCTTTGGAGAACACAAATAAGCACTTGAAGGCACAAATAGCCAAGTCTGCAAGTACCATGGTGGAGAGAACTCCTGAGGAGCATGACTTGCCTGTATCTGAGATAACATCTTCCTCGAGTAATGGTCCATGGTTCCTTTGTGGCCATTTCCCAGTAACACAGTTATTTTGGCCTTCTGTCATCCAGTCTTCAAATTCTGTTCAATTTCAGCATACGCCTCATAGTTCCACTCCCATACCATCAAATATTTCTTTACCGTTGTCTTCTGAGACTGACTTATGTCACAAACAAAATAACCTTATACAGGACAATGAAATACAAAATCCATTATACCTGTTTCCGTGTCCTTGGTTCTTCCCACCTCCAGAGTCTGGACATGGACAAGCGCCACCCTCCCTTGGCCTTAAAGATAAACAAGATAAGTATCCTGTAGGTAAACCATGTAGGATTAGTTCATCTACGAATACAACGGCAAATAAGGACAACCAAGCTACTTTACCTTTCAAAATCAAAACAGAAGCTTCTGGCTTAACAGAAGCCAGACCTATTGATGATCCAAATCACGCCAGTCCTAAGTTTTCTTTGGATGGAGATCAGCAGCGAAGAGGATGTCACATGATGGAAGGATATCATGGACATTCCCTTGGTATTTGTCACCCTACTGCTGTCAAGGAAGAACATTGCCTTCAGTTACATCCTGCTCGCGATGCTGAGGTATCTTCAACAGCTTCTTATACTGCAAATTCTTTGCTGGAAAAGAAACAAGAACAAGTGGATGCAATTGCTGCAGCTGAGGCCAGGAAGAGGAGAAAGGAGCTTACAAAGCTAAAAAGCATTCACAGTCGCCAATGTCGGTTGCAATGTTGA 1230 0.4317 MNQAVEGHQPHQQISTSEPKRIQQDVCSGQVKMEEDADLTKTSILCRSYSLVGCSKSRRNLTEEEKEARRIRRVLANRESARQTIRRRQALCEELTRKAANLAVENENLKREKELALKEYQSLENTNKHLKAQIAKSASTMVERTPEEHDLPVSEITSSSSNGPWFLCGHFPVTQLFWPSVIQSSNSVQFQHTPHSSTPIPSNISLPLSSETDLCHKQNNLIQDNEIQNPLYLFPCPWFFPPPESGHGQAPPSLGLKDKQDKYPVGKPCRISSSTNTTANKDNQATLPFKIKTEASGLTEARPIDDPNHASPKFSLDGDQQRRGCHMMEGYHGHSLGICHPTAVKEEHCLQLHPARDAEVSSTASYTANSLLEKKQEQVDAIAAAEARKRRKELTKLKSIHSRQCRLQC 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2892 409 CDD bZIP_plant_GBF1 70 121 IPR045314 GO:0003700|GO:0006355
Prci3g2892 409 PANTHER G-BOX-BINDING FACTOR 3-RELATED 29 179 IPR044827 GO:0003700|GO:0006355|GO:0043565
Prci3g2892 409 SUPERFAMILY Leucine zipper domain 69 125 IPR046347 GO:0003700|GO:0006355
Prci3g2892 409 Coils Coil 368 388 - -
Prci3g2892 409 SMART brlzneu 65 129 IPR004827 GO:0003700|GO:0006355
Prci3g2892 409 Pfam bZIP transcription factor 65 127 IPR004827 GO:0003700|GO:0006355
Prci3g2892 409 Coils Coil 78 140 - -
Prci3g2892 409 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 67 130 IPR004827 GO:0003700|GO:0006355
Prci3g2892 409 MobiDBLite consensus disorder prediction 269 288 - -
Prci3g2892 409 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2892 Prci-Chr3 40594895 40599037 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2892 22 409 bZIP Transcription Factor Family AT1G19490 39.695 4.73e-64 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci3g2892 bZIP_1 7.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2892 - - pcin:129305693 809.29