Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2888 ATGGCCATGGCCTCACTTCACCGTCCCATGTCCCTCCCTCTTCTCCTGCTCTTTCTTCTGATCTCTGGACACTTGGGATTGGATGCGGAAGCTCGAAATCTGCAGAATCCGACGAAACTGTTCGTCTTTGGGGACTCATATGCGGATACCGGCAACGTCAGGAGAGATGTGGCCGGTTCCTGGAAACAGCCATATGGAATTACTTTTCCCGGTAAACCCGCTGGCCGTTTCTCCGACGGCAGAGTCCTCACTGATTTTCTCGCTAAGTATTTTGGGGTGAGATCGCCGGCACCTTACAGACTGAGAAATCTGATGCCCCAATATGTGAAATACGGGATGAACTTTGCGTATGGTGGCACGGGTGTTTTCAATACCTCTTCTCCAAACCCAAATATGACTGTCCAGATCGATTTCTTCGAAGAGCTCATCAGAGACAAAGTGTACACCTTCGCTGACCTCTGCAACTCCGTCGCTCTGGTCTCCGTCGCCGGCAACGACTACAGTTTTTATCTCGCCACGAATGGCACTGCCGAGGGGGCGCCGGCGTTTATTGCGTCGGTGGTGAACCAGACGGTGAAAAATGTAGCTCGAATCCATGGATTGGGAGTGAAGAAAATTGCAGTGAGCGGTCTGCAACCCCTCGGGTGCCTCCCGCAGACAACAGCTTCATCGTCATTCCAGCAGTGCAACTCCACCTTCAACACCTTCGCCACCCTTCACAACACCCTCTTGGGCCAAGGGCTGGCGAAACTGAAGGAAGAAGCCAACGACAATTCCAGCTTTGTCGTTCTTGACCTTTTCGACAGTTTCATGTCGGTACTGAACCACCCCTCCACCCATAACATACAGAACCAGTTCAAGCCTTGCTGCGTTGGGGTGAGCAGCCAATACTCCTGCGGAAGCGTGGACGACAAGACCATGGCCAAGAAATACACAGTGTGTGAGGATCCTAAGTCCGCTTTCTTTTGGGACTTGGTGCACCCAACGCAAGCTGGGTGGCATGCCGTTTATAACAACTTGCTCACCACTAATGCCCTTCAACAACTTCAATAG 1053 0.5204 MAMASLHRPMSLPLLLLFLLISGHLGLDAEARNLQNPTKLFVFGDSYADTGNVRRDVAGSWKQPYGITFPGKPAGRFSDGRVLTDFLAKYFGVRSPAPYRLRNLMPQYVKYGMNFAYGGTGVFNTSSPNPNMTVQIDFFEELIRDKVYTFADLCNSVALVSVAGNDYSFYLATNGTAEGAPAFIASVVNQTVKNVARIHGLGVKKIAVSGLQPLGCLPQTTASSSFQQCNSTFNTFATLHNTLLGQGLAKLKEEANDNSSFVVLDLFDSFMSVLNHPSTHNIQNQFKPCCVGVSSQYSCGSVDDKTMAKKYTVCEDPKSAFFWDLVHPTQAGWHAVYNNLLTTNALQQLQ 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2888 350 Pfam GDSL-like Lipase/Acylhydrolase 40 338 IPR001087 GO:0016788
Prci3g2888 350 SUPERFAMILY SGNH hydrolase 36 341 - -
Prci3g2888 350 PANTHER OSJNBB0059K02.9 PROTEIN 16 347 - -
Prci3g2888 350 Gene3D SGNH hydrolase 29 347 IPR036514 -
Prci3g2888 350 CDD SGNH_plant_lipase_like 40 342 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2888 Prci-Chr3 40586414 40588842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2888 27 336 Pollen Coat Proteome AT1G75930 26.923 2.42e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2888 - - gmx:100789208 464.922