Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2880 ATGGGGATGGGGGAAGTTGAGACGACGAACTCGCAAGGCGAGGTGGAGTCAAGTCCCAAGAACAACCACTCATTCTCGTCGCTGGGAAGACAATCGTCGATATACTCGCTCACGCTTGACGAGTTCCAGCACACGCTGTGCGAGAGCGGCAAGAATTTCGGGTCCATGAACATGGACGAGTTTCTCAGCAGCATCTGGAACGCCGAAGAGAGCCAAGCCATTAACTCCAACCACAACACTAGCGCCTGCAACAATAACAACACAAGCTTGCCTCTGAATGAAGCATCCGCTGAAAAAGGAGTGATAAGGAAGCAGCTAAGCCTTCCTCGTCAAGGCTCTCTGACGCTGCCGGCGCCGCTCTGTAGGAAGACGGTTGATGAAGTTTGGTCTGAGATACACAGAGCACAGCAGGGTCATCAGGGTAATAGCGGTGGCGATAGTGGCAATGCGCTGAATAACGAATCTGCCCCTCGCCAGCCTACTTTTGGGGAGATGACTCTCGAGGATTTCTTAATCAAAGCAGGGGTGGTTCGGGAATCATGTGCTGCTCCAATGCCCGCCCAAGTTCAAGGTCAAGTCTCGACGCAGCCGTATGGGATGTACCCGAATAACAACTCTACGATGGGACCCTCTTTTGTTAGCAGGACTGTATTGGCGGGCAATGTGGTTCCGCCGTACCAGACGGTGGCCCAGGGAGAGCCTTCTTCTGGGTACGCCGGGAATGGGAAGAGGAATAATGGGTATCCTCCTCCACCGCCGCCGTCGGGGGTTTGCTACGGAGGAAGGGTGCTGAGTGGAGGTGGTGGGTATGGGGCGGCGGCGCCGACTATGGCAATCGGAGCGCCGTTGAGCCCTGTTTCGTCGGATGGGCTGGGAACAAATGAGAACTGCGGGAATCAGTTTGGGGTAGAGATGGGGTTGTTGAGAGGAAGGAAGAGGATCGTCGATGGTCCGGTGGAGAAGGTGGTAGAGAGAAGGCAGAGGAGGATGATCAAGAACAGAGAGTCGGCCGCGAGATCCAGAGCCAGAAAACAGGCATATACAGTTGAATTAGAAGCAGAACTGAACCAATTAAGAGAGGAGAACGCCAATCTGAAACTGGCTCTGGTACTAGCATCATGA 1122 0.5419 MGMGEVETTNSQGEVESSPKNNHSFSSLGRQSSIYSLTLDEFQHTLCESGKNFGSMNMDEFLSSIWNAEESQAINSNHNTSACNNNNTSLPLNEASAEKGVIRKQLSLPRQGSLTLPAPLCRKTVDEVWSEIHRAQQGHQGNSGGDSGNALNNESAPRQPTFGEMTLEDFLIKAGVVRESCAAPMPAQVQGQVSTQPYGMYPNNNSTMGPSFVSRTVLAGNVVPPYQTVAQGEPSSGYAGNGKRNNGYPPPPPPSGVCYGGRVLSGGGGYGAAAPTMAIGAPLSPVSSDGLGTNENCGNQFGVEMGLLRGRKRIVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENANLKLALVLAS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2880 373 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 323 366 IPR004827 GO:0003700|GO:0006355
Prci3g2880 373 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 323 370 - -
Prci3g2880 373 Coils Coil 341 368 - -
Prci3g2880 373 MobiDBLite consensus disorder prediction 135 160 - -
Prci3g2880 373 Pfam bZIP transcription factor 325 366 IPR004827 GO:0003700|GO:0006355
Prci3g2880 373 SMART brlzneu 321 373 IPR004827 GO:0003700|GO:0006355
Prci3g2880 373 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 328 343 IPR004827 GO:0003700|GO:0006355
Prci3g2880 373 SUPERFAMILY Leucine zipper domain 325 366 IPR046347 GO:0003700|GO:0006355
Prci3g2880 373 MobiDBLite consensus disorder prediction 231 254 - -
Prci3g2880 373 MobiDBLite consensus disorder prediction 1 26 - -
Prci3g2880 373 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 366 IPR043452 GO:0003700|GO:0045893
Prci3g2880 373 MobiDBLite consensus disorder prediction 135 161 - -
Prci3g2880 373 CDD bZIP_plant_BZIP46 325 366 - -
Prci3g2880 373 Gene3D - 323 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2880 Prci-Chr3 40503948 40507907 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2880 5 369 bZIP Transcription Factor Family AT2G36270 52.518 1.21e-106 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci3g2880 bZIP_1 1.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2880 K14432 - gmx:106794959 412.92