Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2878 ATGGGGATGGGGGAAGTTGAGACGACGAACTCGCAAGGCGAGGTGGAGTCAAGTCCCAAGAACAACCACTCATTCTCGTCGCTGGGAAGACAATCGTCGATATACTCGCTCACGCTTGACGAGTTCCAGCACACGCTGTGCGAGAGCGGCAAGAATTTCGGGTCCATGAACATGGACGAGTTTCTCAGCAGCATCTGGAACGCCGAAGAGAGCCAAGCCATTAACTCCAACCACAACACTAGCGCCTGCAACAATAACAACACAAGCTTGCCTCTGAATGAAGCATCCGCTGAAAAAGGAGTGATAAGGAAGCAGCTAAGCCTTCCTCGTCAAGGCTCTCTGACGCTGCCGGCGCCGCTCTGTAGGAAGACGGTTGATGAAGTTTGGTCTGAGATACACAGAGCACAGCAGGGTCATCAGGGTAATAGCGGTGGCGATAGTGGCAATGCGCTGAATAACGAATCTGCCCCTCGCCAGCCTACTTTTGGGGAGATGACTCTCGAGGATTTCTTAATCAAAGCAGGGGTGGTTCGGGAATCATGTGCTGCTCCAATGCCCGCCCAAGTTCAAGGTCAAGTCTCGACGCAGCCGTATGGGATGTACCCGAATAACAACTCTACGATGGGACCCTCTTTTGTTAGCAGGACTGTATTGGCGGGCAATGTGGTTCCGCCGTACCAGACGGTGGCCCAGGGAGAGCCTTCTTCTGGGTACGCCGGGAATGGGAAGAGGAATAATGGGTATCCTCCTCCACCGCCGCCGTCGGGGGTTTGCTACGGAGGAAGGGTGCTGAGTGGAGGTGGTGGGTATGGGGCGGCGGCGCCGACTATGGCAATCGGAGCGCCGTTGAGCCCTGTTTCGTCGGATGGGCTGGGAACAAATGAGAACTGCGGGAATCAGTTTGGGGTAGAGATGGGGTTGTTGAGAGGAAGGAAGAGGATCGTCGATGGTCCGGTGGAGAAGGTGGTAGAGAGAAGGCAGAGGAGGATGATCAAGAACAGAGAGTCGGCCGCGAGATCCAGAGCCAGAAAACAGGCATATACAGTTGAATTAGAAGCAGAACTGAACCAATTAAGAGAGGAGAACGCCAATCTGAAACTGGCTCTGGCCGAGCTTGAGAGGAGAAGAAAGCAACAGGGTCTTGAGGAAGCGAACATGAGAGTTCCTACCAAAGCTCAGAAGGCAAGAGAGAAATTGAGGTCCTTGATAAGGGCTGTGAGCTGTCCTTTGTGA 1233 0.5385 MGMGEVETTNSQGEVESSPKNNHSFSSLGRQSSIYSLTLDEFQHTLCESGKNFGSMNMDEFLSSIWNAEESQAINSNHNTSACNNNNTSLPLNEASAEKGVIRKQLSLPRQGSLTLPAPLCRKTVDEVWSEIHRAQQGHQGNSGGDSGNALNNESAPRQPTFGEMTLEDFLIKAGVVRESCAAPMPAQVQGQVSTQPYGMYPNNNSTMGPSFVSRTVLAGNVVPPYQTVAQGEPSSGYAGNGKRNNGYPPPPPPSGVCYGGRVLSGGGGYGAAAPTMAIGAPLSPVSSDGLGTNENCGNQFGVEMGLLRGRKRIVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENANLKLALAELERRRKQQGLEEANMRVPTKAQKAREKLRSLIRAVSCPL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2878 410 Coils Coil 341 387 - -
Prci3g2878 410 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 323 379 - -
Prci3g2878 410 CDD bZIP_plant_BZIP46 325 379 - -
Prci3g2878 410 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 379 IPR043452 GO:0003700|GO:0045893
Prci3g2878 410 MobiDBLite consensus disorder prediction 135 160 - -
Prci3g2878 410 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 328 343 IPR004827 GO:0003700|GO:0006355
Prci3g2878 410 SMART brlzneu 321 387 IPR004827 GO:0003700|GO:0006355
Prci3g2878 410 MobiDBLite consensus disorder prediction 1 26 - -
Prci3g2878 410 MobiDBLite consensus disorder prediction 231 254 - -
Prci3g2878 410 Pfam bZIP transcription factor 325 377 IPR004827 GO:0003700|GO:0006355
Prci3g2878 410 MobiDBLite consensus disorder prediction 135 161 - -
Prci3g2878 410 SUPERFAMILY Leucine zipper domain 325 375 IPR046347 GO:0003700|GO:0006355
Prci3g2878 410 Gene3D - 323 379 - -
Prci3g2878 410 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 323 375 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2878 Prci-Chr3 40503948 40507907 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2878 5 379 bZIP Transcription Factor Family AT2G36270 53.396 4.14e-113 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci3g2878 bZIP_1 9.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2878 K14432 - gmx:100790948 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2964 1 48320543 48323164 Prci3g2878 3 40503948 40507907 CCT