Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2783 ATGGCGACGTACTTTCTTGGTAATTCTGAAATCCAACCACCCGATGGCCTCCAAACTCTGGTTCTCATGAACCCCGGCTACATCCACTACTCCGACACCCCGACGCCTCCCCCGCCGCACCCCAGCAACTTGGTCTTCCTCAACTCCATCGCAGCTGGCAACAACTCGCTCACTCCCCAAAACCTCCACCACGTGTCACCCAATCACACCCAACAATTCGTTGGTATCCCTCTGCCGGCCGCCGCCGCCGCCGCCGCCTCCTCCTCCCAGGACCCTAGCCAGCAACACTCCGTGCATGCTCATCAAGATGGCTCCACCTTGCATGGATTTGTGCCTCGCATGCAGTGCAATCTCTGGAACCCAATCTACCCAAACGCGACGGCGCGTGAGACTCCACGTGCACAGCAGGGACTGTCGCTGAGCCTGTCCTCCCAGCAAGCTGGAATGGGGTCTTTTCGTGTCGATCGTGAAGCAACATCACGGGGTCAAGCGCCTGCTATGTCTGGGGAAGATGTTCGCGGGTCTGGAGGGTCGTCGTCTTCGGATTCTGGGGTGACCAACGCGAACGGTTTTTCGGGGATTCAGGGTGCGATTCTGAGCTCCAAGTACTTGAAAGCAGCACAGGAGCTTCTCGACGAGGCCGTCAATGTCAACAACGGCATTAAGACCGAACTGGGAAAGAAAGGCGGTGGGGCCCAAACTAAGACCACCGGGGAGACATCCGGGACAGCCGCCACTGGCGACGGTTCTGCTGGTGGAGAAGGAACCCTTAAGCGTGCCACCGAGCTTTCGGCTGCGGAGAGACAAGAAATTCAGATGAAGAAGGCTAAGCTGATCAACATGCTTGACGAGGTGGAGCAGAGGTACAGGCAGTACCACCAGCAGATGCAGATTGTGATTTCGTCATTCGAGCAAGCTGCGGGAATTGGTTCGGCCAGAACATACACGGCCCTTGCGCTACAAACAATCTCCAAGCAGTTTAGGTGCTTGAAAGATGCCATAACAGCCCAAATTCGAGCTGCTAATAAGAGCTTAGGAGAAGAAGATTGCTTTGGAACCAAGATTGAAGGTTCGAGACTCAAGTTCGTTGACCATCACCTGCGCCAACAGCGAGCTCTCCAACAGTTGGGAATGATCCAGCAAAATGCTTGGAGACCCCAGAGAGGATTGCCTGAAAGATCTGTTTCTGTCCTTCGTGCTTGGCTCTTTGAGCACTTCCTCCATCCTTATCCCAAGGATTCAGATAAGCATATGCTCGCTAAACAAACAGGCCTCACCAGGAGCCAGGTTTCAAATTGGTTCATTAATGCTCGAGTTCGGCTCTGGAAACCAATGGTGGAAGAAATGTACACGGAGGAGATGAAGGAGCAAGAACAGAATGAATCTGAAGACAAATCAGGCAAGAGCGGTGAAGATCCTGCAGCTCCACAACAAAAAGGCCCTGCCGCTGAAACGGACGCTAGAAGCCTCAATTCCAACCAAGACAGGCCTTCAAACCAGAAAACTCCCACAGTTTCAGTTTCTAAACCATTAATATTATCGCCGGGTAAGGATAATATGAGAGACCAGTTTGGTTTCAGCTTCATGGGATCATCAGAGCTGGAAGGGATCACACAGAGAAGTCCCAAGAAACCAAGAAACCAAGAACTTCCGCACTTCCCAACTTCAATAAACATGGACATGAAGACAAATGAGGCCAATAATGAGCAGCTTTCTATAAATTTTGGAGACGAAAGGCAGGGAAAAGATGGATTCTCTTTCATGGGAACCCAAGCAAACTTTATCGGAGGTTTTGGACAATACCCAATTGGGGAGATTGGAAGGTTTGACGCAGAGCAGTTTACACCAAGGTTTTCAGGTAACGGGGTTTCCCTGACTCTTGGTCTTCCCCACTGTGACACATTGTCAAGTAGCCATCAAAGTTTTCTCCCAAACCAGAACATTCAACTGGGAAGAAGACTGGATATGGCTGAATCAAACGAGTATGGAGCCATAAATCCTTCCACTACTCACTCATCAACTGTGTATGAGAACATGAACATGCAGAACCCAAAGAGGTTTGCTGCACAATTGTTGCCAGACTTTGTCACCTAA 2094 0.5086 MATYFLGNSEIQPPDGLQTLVLMNPGYIHYSDTPTPPPPHPSNLVFLNSIAAGNNSLTPQNLHHVSPNHTQQFVGIPLPAAAAAAASSSQDPSQQHSVHAHQDGSTLHGFVPRMQCNLWNPIYPNATARETPRAQQGLSLSLSSQQAGMGSFRVDREATSRGQAPAMSGEDVRGSGGSSSSDSGVTNANGFSGIQGAILSSKYLKAAQELLDEAVNVNNGIKTELGKKGGGAQTKTTGETSGTAATGDGSAGGEGTLKRATELSAAERQEIQMKKAKLINMLDEVEQRYRQYHQQMQIVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITAQIRAANKSLGEEDCFGTKIEGSRLKFVDHHLRQQRALQQLGMIQQNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYTEEMKEQEQNESEDKSGKSGEDPAAPQQKGPAAETDARSLNSNQDRPSNQKTPTVSVSKPLILSPGKDNMRDQFGFSFMGSSELEGITQRSPKKPRNQELPHFPTSINMDMKTNEANNEQLSINFGDERQGKDGFSFMGTQANFIGGFGQYPIGEIGRFDAEQFTPRFSGNGVSLTLGLPHCDTLSSSHQSFLPNQNIQLGRRLDMAESNEYGAINPSTTHSSTVYENMNMQNPKRFAAQLLPDFVT 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2783 697 FunFam BEL1-like homeodomain protein 9 387 449 - -
Prci3g2783 697 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 88 469 - -
Prci3g2783 697 SUPERFAMILY Homeodomain-like 385 451 IPR009057 -
Prci3g2783 697 Pfam Associated with HOX 198 335 IPR006563 -
Prci3g2783 697 SMART prehox3 192 336 IPR006563 -
Prci3g2783 697 MobiDBLite consensus disorder prediction 86 102 - -
Prci3g2783 697 MobiDBLite consensus disorder prediction 130 184 - -
Prci3g2783 697 MobiDBLite consensus disorder prediction 233 247 - -
Prci3g2783 697 Gene3D - 387 466 - -
Prci3g2783 697 MobiDBLite consensus disorder prediction 452 520 - -
Prci3g2783 697 SMART HOX_1 384 448 IPR001356 GO:0003677
Prci3g2783 697 MobiDBLite consensus disorder prediction 484 509 - -
Prci3g2783 697 MobiDBLite consensus disorder prediction 452 470 - -
Prci3g2783 697 MobiDBLite consensus disorder prediction 130 150 - -
Prci3g2783 697 ProSiteProfiles 'Homeobox' domain profile. 381 444 IPR001356 GO:0003677
Prci3g2783 697 Coils Coil 204 224 - -
Prci3g2783 697 MobiDBLite consensus disorder prediction 84 106 - -
Prci3g2783 697 Pfam Homeobox KN domain 401 440 IPR008422 GO:0003677|GO:0006355
Prci3g2783 697 Coils Coil 268 295 - -
Prci3g2783 697 MobiDBLite consensus disorder prediction 222 255 - -
Prci3g2783 697 CDD homeodomain 384 445 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2783 Prci-Chr3 39853431 39858083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2783 1 696 Homeobox Transcription Factor Family AT2G35940 49.481 1.37e-179 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Prci3g2783 POX 3.7e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2783 - - pcin:129306285 1298.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3035 1 48944032 48947961 Prci3g2783 3 39853431 39858083 CCT
Prci3g2783 3 39853431 39858083 Prci3g2783 3 39853431 39858083 ECH