Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2773 ATGAGCAACAACGGCACGGATAATTCCTCTGGATTCCTAGGATCCAACAACATTAGTGGATTCGGGTATGGCATAGGAATATCAAGTGGGATTCTGCTGCTCGTCACCACCATCACCCTCACTTCCTATTTCTGCACCAGAACACAGTCACCGTCTTCTCCGTCTGCCTCACCCGCTCAGAGAAATCTCCCCACGTTCCTTGAGCCGCATCACACGGTGGTGGATGTGGGGATAGACGAAGCCACCATTCTGAGCTACCCCAAGCTGCTGTATTCTGAGGCCAAGCTCCAAAAGCCAGATTCCACGGGGACGTGCTGCTCCATTTGCCTAGGAGATTATAAAAGCAGGGACATGCTTCGGGAGCTACCTGATTGTGGCCATATATTCCACCTCAAGTGCATTGATCCGTGGCTCAGATTGCATCCGACGTGTCCTCTCTGCAGAACATCTCCTGTCCCGACACCACTCGCAACACCTCTCGCCGAGGTGGTTCCGTTGACCACCATGCGGGCACCATAA 519 0.5318 MSNNGTDNSSGFLGSNNISGFGYGIGISSGILLLVTTITLTSYFCTRTQSPSSPSASPAQRNLPTFLEPHHTVVDVGIDEATILSYPKLLYSEAKLQKPDSTGTCCSICLGDYKSRDMLRELPDCGHIFHLKCIDPWLRLHPTCPLCRTSPVPTPLATPLAEVVPLTTMRAP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2773 172 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Prci3g2773 172 SMART ring_2 106 147 IPR001841 -
Prci3g2773 172 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 162 IPR045899 -
Prci3g2773 172 CDD RING-H2_EL5-like 105 148 - -
Prci3g2773 172 SUPERFAMILY RING/U-box 91 153 - -
Prci3g2773 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 153 IPR013083 -
Prci3g2773 172 Pfam Ring finger domain 106 148 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2773 Prci-Chr3 39771409 39772519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2773 10 171 C3H Transcription Factor Family AT2G35910 60.736 3.99e-56 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2773 - - gmx:121172638 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3061 1 49090509 49091293 Prci3g2773 3 39771409 39772519 CCT