Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2750 ATGATGGAGAAAGCAAATACGTGCGGGGGGCTCGCAAGAACGAAATCGGATCAGCTGGCGGAGGCTTTGAAGTCGCAATTGTCGAGTGAATCGATGGGATTGGTAGAACAAGGCATCACCGGGAGCGGAGCAACGCCGTCGAGGAAGTCGAGTAGGCGGATGACGGGGGTGTCGCCGGGGAGGAGCGGAGGAGGGAAGAACACGCACATGAGGAAGACGAGGAGCGCTCAGCTGAAGTTCGAGGTGGACGAGGTCAGCAGCGGCGCGGCTCTGAGCCGAGCTTCGAGTGCCAGCCTGGGCCTCTCATTCTCCTTCACCGGCTTCACCATCCCTCCCGACGAAATCGCCGATTCCAAGCCCTTCAGCGACGACGATATCCCGGAGGATATCGAAGCTGGAGCTGATAAGCCAAAGCTTCAAACAGAACCCACCCTTCCCATTTATCTCAAGTTCAGGGAAATCAGTTACAAGGTAGTGCTCAGAGGAATGACAACATCGAAGGAGAAGGAGATATTGCATGGGATCACTGGTTCCGTGAATCCTGGAGAAGTTCTGGCTTTGATGGGTCCTTCAGGAAGCGGAAAGACGACTCTCCTGAATCTTCTTGGAGGCAGGCTAAATCAGCCCACTGTAAGTGGTTCCATCACGTACAATGACCAACCATATTCCAAGTTCTTGAAGAGCAGGATAGGATTCGTGACTCAAGATGATGTTCTGTTTCCTCACCTTACTGTGAAGGAAACACTGACATACGCAGCCCTCCTGAGACTGCCAAAGACAACTACGAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTCATTCATGAGCTTGGCTTGGACAGGTGCCAAGACACTATGATAGGCGGTTCCTTTGTTCGTGGAGTATCTGGTGGAGAGAGGAAGAGAGTCTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTGTTTCTCGACGAACCAACTTCTGGTTTGGATTCCACAACTGCCTTGAGAACTGTTCAGATGCTGCAAAACATAGCAGAGGCTGGCAAAACAGTAGTGACAACAATTCACCAACCATCTAGCAGACTCTTCCACAGATTCGATAAGTTGATCCTTCTAGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCGTCAGAAGCAATGATTTACTTCCAATCTGTAGGATGCTTACCTCTTATTGCCATGAACCCGGCAGAATTCTTGCTGGACCTTGCTAATGGAAACATAAATGACGTATCTGTACCATCAGAGTTAGAGGATAAAGTACAGGTGGGAAATGCAGCAACTGAAACCCGGAATGGGAAACCATCACCTGCACTCGTACATGAGTATCTGGTGGAGGCCTATGAGACCCGAGTTGCAGAAACAGAGAAGAGAAAGCTAATGGATCCTATCCCCCTTGATGAAGAAGTGAAGACTCAGGTTTCTTCTCCTAAAAGACAGTGGGGTGCGAGCTGGTGTGAGCAATATTCCATATTGTTCTGGAGGGGAATCAAAGAGCGGAGACACGACTATTTTAGCTGGTTGAGAATCACCCAAGTTCTGTCCACTGCAATCATCTTAGGATTACTTTGGTGGCGATCTGATGCCACCACACCAAAGGGTCTTCAGGATCAGGCAGGGCTGCTTTTCTTTATTGCTGTGTTTTGGGGATTCTTTCCCGTGTTCACTGCAATATTTACCTTTCCTCAAGAGAGAGCCATGCTGAATAAGGAACGTGCGGCTGACATGTACAGACTAAGTGCATACTTCTTAGCTAGGACCACGAGTGACCTTCCATTGGATTTGATATTACCTGTCCTTTTCCTCCTTGTTGTTTATTTCATGGCTGGTTTGAGAGTGAGTGCAGCTCCCTTTTTCCTCAGCATTCTTACTGTTTTCCTCTGCATCGTGGCAGCTCAGGGACTTGGACTTGCCATTGGGGCCACACTAATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTTACAGTGATGACCTTCATGCTGGCCGGCGGATTCTTTGTGAAGAAAGTCCCTGTATTTATATCTTGGATACGATACATGTCATTCAACTACCACACGTATAAACTCCTATTGAAGGTGCAATATGAGCACATAACACCAAGCGTAAATGGGATGAGAATTGACAGTGGTTGGACGGAGGTGGCTGCTCTGATAGCCATGGTTTTTGGTTATCGTCTCCTGGCTTACCTTTCCTTGCGATGGATGAAACTTCAATGA 2229 0.4805 MMEKANTCGGLARTKSDQLAEALKSQLSSESMGLVEQGITGSGATPSRKSSRRMTGVSPGRSGGGKNTHMRKTRSAQLKFEVDEVSSGAALSRASSASLGLSFSFTGFTIPPDEIADSKPFSDDDIPEDIEAGADKPKLQTEPTLPIYLKFREISYKVVLRGMTTSKEKEILHGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLNQPTVSGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAALLRLPKTTTKEQKEKRALDVIHELGLDRCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRTVQMLQNIAEAGKTVVTTIHQPSSRLFHRFDKLILLGKGSLLYFGKASEAMIYFQSVGCLPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQVGNAATETRNGKPSPALVHEYLVEAYETRVAETEKRKLMDPIPLDEEVKTQVSSPKRQWGASWCEQYSILFWRGIKERRHDYFSWLRITQVLSTAIILGLLWWRSDATTPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRVSAAPFFLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKKVPVFISWIRYMSFNYHTYKLLLKVQYEHITPSVNGMRIDSGWTEVAALIAMVFGYRLLAYLSLRWMKLQ 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2750 742 Gene3D - 148 388 IPR027417 -
Prci3g2750 742 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 113 733 - -
Prci3g2750 742 MobiDBLite consensus disorder prediction 21 57 - -
Prci3g2750 742 FunFam ABC transporter G family member 22 159 389 - -
Prci3g2750 742 CDD ABCG_EPDR 146 377 - -
Prci3g2750 742 Pfam ABC-2 type transporter 490 699 IPR013525 GO:0016020|GO:0140359
Prci3g2750 742 ProSitePatterns ABC transporters family signature. 295 309 IPR017871 GO:0005524|GO:0016887
Prci3g2750 742 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 149 395 IPR003439 GO:0005524
Prci3g2750 742 Pfam ABC-2 type transporter 352 412 IPR043926 GO:0140359
Prci3g2750 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 383 IPR027417 -
Prci3g2750 742 MobiDBLite consensus disorder prediction 21 73 - -
Prci3g2750 742 Pfam ABC transporter 172 323 IPR003439 GO:0005524
Prci3g2750 742 SMART AAA_5 181 372 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2750 Prci-Chr3 39661929 39670547 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2750 170 381 Calmodulin-binding Proteins AT2G36910 30.734 1.41e-15 79.3