Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2749 ATGATGATAATAAAAAATCATAGTTATTTTCTGGCGGGAGTGGTGATGATGGAGAAAGCAAATACGTGCGGGGGGCTCGCAAGAACGAAATCGGATCAGCTGGCGGAGGCTTTGAAGTCGCAATTGTCGAGTGAATCGATGGGATTGGTAGAACAAGGCATCACCGGGAGCGGAGCAACGCCGTCGAGGAAGTCGAGTAGGCGGATGACGGGGGTGTCGCCGGGGAGGAGCGGAGGAGGGAAGAACACGCACATGAGGAAGACGAGGAGCGCTCAGCTGAAGTTCGAGGTGGACGAGGTCAGCAGCGGCGCGGCTCTGAGCCGAGCTTCGAGTGCCAGCCTGGGCCTCTCATTCTCCTTCACCGGCTTCACCATCCCTCCCGACGAAATCGCCGATTCCAAGCCCTTCAGCGACGACGATATCCCGGAGGATATCGAAGCTGGAGCTGATAAGCCAAAGCTTCAAACAGAACCCACCCTTCCCATTTATCTCAAGTTCAGGGAAATCAGTTACAAGGTAGTGCTCAGAGGAATGACAACATCGAAGGAGAAGGAGATATTGCATGGGATCACTGGTTCCGTGAATCCTGGAGAAGTTCTGGCTTTGATGGGTCCTTCAGGAAGCGGAAAGACGACTCTCCTGAATCTTCTTGGAGGCAGGCTAAATCAGCCCACTGTAAGTGGTTCCATCACGTACAATGACCAACCATATTCCAAGTTCTTGAAGAGCAGGATAGGATTCGTGACTCAAGATGATGTTCTGTTTCCTCACCTTACTGTGAAGGAAACACTGACATACGCAGCCCTCCTGAGACTGCCAAAGACAACTACGAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTCATTCATGAGCTTGGCTTGGACAGGTGCCAAGACACTATGATAGGCGGTTCCTTTGTTCGTGGAGTATCTGGTGGAGAGAGGAAGAGAGTCTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTGTTTCTCGACGAACCAACTTCTGGTTTGGATTCCACAACTGCCTTGAGAACTGTTCAGATGCTGCAAAACATAGCAGAGGCTGGCAAAACAGTAGTGACAACAATTCACCAACCATCTAGCAGACTCTTCCACAGATTCGATAAGTTGATCCTTCTAGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCGTCAGAAGCAATGATTTACTTCCAATCTGTAGGATGCTTACCTCTTATTGCCATGAACCCGGCAGAATTCTTGCTGGACCTTGCTAATGGAAACATAAATGACGTATCTGTACCATCAGAGTTAGAGGATAAAGTACAGGTGGGAAATGCAGCAACTGAAACCCGGAATGGGAAACCATCACCTGCACTCGTACATGAGTATCTGGTGGAGGCCTATGAGACCCGAGTTGCAGAAACAGAGAAGAGAAAGCTAATGGATCCTATCCCCCTTGATGAAGAAGTGAAGACTCAGGTTTCTTCTCCTAAAAGACAGTGGGGTGCGAGCTGGTGTGAGCAATATTCCATATTGTTCTGGAGGGGAATCAAAGAGCGGAGACACGACTATTTTAGCTGGTTGAGAATCACCCAAGTTCTGTCCACTGCAATCATCTTAGGATTACTTTGGTGGCGATCTGATGCCACCACACCAAAGGGTCTTCAGGATCAGGCAGGGCTGCTTTTCTTTATTGCTGTGTTTTGGGGATTCTTTCCCGTGTTCACTGCAATATTTACCTTTCCTCAAGAGAGAGCCATGCTGAATAAGGAACGTGCGGCTGACATGTACAGACTAAGTGCATACTTCTTAGCTAGGACCACGAGTGACCTTCCATTGGATTTGATATTACCTGTCCTTTTCCTCCTTGTTGTTTATTTCATGGCTGGTTTGAGAGTGAGTGCAGCTCCCTTTTTCCTCAGCATTCTTACTGTTTTCCTCTGCATCGTGGCAGCTCAGGGACTTGGACTTGCCATTGGGGCCACACTAATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTTACAGTGATGACCTTCATGCTGGCCGGCGGATTCTTTGTGAAGAAAGTCCCTGTATTTATATCTTGGATACGATACATGTCATTCAACTACCACACGTATAAACTCCTATTGAAGGTGCAATATGAGCACATAACACCAAGCGTAAATGGGATGAGAATTGACAGTGGTTGGACGGAGGTGGCTGCTCTGATAGCCATGGTTTTTGGTTATCGTCTCCTGGCTTACCTTTCCTTGCGATGGATGAAACTTCAATGA 2274 0.4776 MMIIKNHSYFLAGVVMMEKANTCGGLARTKSDQLAEALKSQLSSESMGLVEQGITGSGATPSRKSSRRMTGVSPGRSGGGKNTHMRKTRSAQLKFEVDEVSSGAALSRASSASLGLSFSFTGFTIPPDEIADSKPFSDDDIPEDIEAGADKPKLQTEPTLPIYLKFREISYKVVLRGMTTSKEKEILHGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLNQPTVSGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAALLRLPKTTTKEQKEKRALDVIHELGLDRCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRTVQMLQNIAEAGKTVVTTIHQPSSRLFHRFDKLILLGKGSLLYFGKASEAMIYFQSVGCLPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQVGNAATETRNGKPSPALVHEYLVEAYETRVAETEKRKLMDPIPLDEEVKTQVSSPKRQWGASWCEQYSILFWRGIKERRHDYFSWLRITQVLSTAIILGLLWWRSDATTPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRVSAAPFFLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKKVPVFISWIRYMSFNYHTYKLLLKVQYEHITPSVNGMRIDSGWTEVAALIAMVFGYRLLAYLSLRWMKLQ 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2749 757 Pfam ABC-2 type transporter 505 714 IPR013525 GO:0016020|GO:0140359
Prci3g2749 757 Pfam ABC transporter 187 338 IPR003439 GO:0005524
Prci3g2749 757 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 164 410 IPR003439 GO:0005524
Prci3g2749 757 SMART AAA_5 196 387 IPR003593 GO:0016887
Prci3g2749 757 MobiDBLite consensus disorder prediction 46 72 - -
Prci3g2749 757 CDD ABCG_EPDR 161 392 - -
Prci3g2749 757 ProSitePatterns ABC transporters family signature. 310 324 IPR017871 GO:0005524|GO:0016887
Prci3g2749 757 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 127 748 - -
Prci3g2749 757 Gene3D - 163 403 IPR027417 -
Prci3g2749 757 MobiDBLite consensus disorder prediction 46 88 - -
Prci3g2749 757 Pfam ABC-2 type transporter 367 427 IPR043926 GO:0140359
Prci3g2749 757 FunFam ABC transporter G family member 22 174 404 - -
Prci3g2749 757 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 398 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2749 Prci-Chr3 39661925 39670547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2749 185 396 Calmodulin-binding Proteins AT2G36910 30.734 1.08e-15 79.7