Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2748 ATGGGCAACGTCTGCGTGGGGCCTAACCTTGGGAATGGGTTCTTGCAATCGATCACATCCGCTTTCAAGAAAACCCCGCCGCAGGAGGGCAGGCTTCCGGCTCCTAACGCCGACAACAACAATAAAAGCGCGGAAAATGCTGCGCCTGATTCATCCAAAGATTCTGATGCTCCAAAGCAAGTTCAAAGTACACCACCTGAATTGGTGAAAATTCCCAGCGATGAAAAACTTAAACCACCGCCAGAACCCGAAAAGCCTGCTGAACCTGAGGTCCATGAACCTACCGGCGGCACTGCTCATGCTGGGAAAGCTGAAAAGCCTGCCAAGCCGGAGATGGTCAATCACCCTGCTTCTAACAATGCTGCCGATGCCGGGGAATCTGAAAAGCCAGTCAAGCTGGAGGTGGTCAACGAAGCTGCCTCTAATAATACCACGAATGCTGGCGAAACTACGAAACCTACTCATGTTAAAAGGGCATCGAGCATGGGACTTCGAATAGAATCGGTCTTAGGGAGGAAAACTGAGAATATAAAGGATCTTTATAGTCTGGGGCGAAAGCTAGGACAAGGGCAGTTTGGGACAACATACTACTGTCTAGAGAAGGCGACTGGCAAAGAGTTTGCTTGTAAATCCATTCTTAAGAGAAAACTGAACACACAAGAGGACGTAGACGATGTCAGAAGGGAGATTCAGATAATGCACCATTTGGCTGGTCATCCCAATGTGATTCAGATAATCGGTGCTTATGAGGATGCTGTAGCTGTTCATGTCGTTATGGAACTCTGTGCTGGTGGAGAGCTTTTTGACAGGATCATACAGAGAGGGCACTACACTGAGAAAAGGGCGGCCGAGCTTGCAAGGGTAATAGTTGGTGTCGTGGAGGCATTCCATTCTATGGGCGTCATGCATCGGGACTTGAAGCCAGAAAACTTTCTGTTCGTCAACCAAGAGGAAGAGGCACAACTTAAGACAATAGATTTCGGGCTCTCGGTGTTCTTCAGACCAGGTGAATCATTTACCGATGTGGTTGGGAGCCCCTATTATGTGGCCCCTGAAGTTTTACGGAAGTTCTATGGTCAAGAATGTGACGTCTGGAGTGCAGGGGTGATCATTTATATTTTACTGAGTGGAGTTCCCCCATTTTGGGACGAGACGGAGCTAGGCATATTTGACCAAGTTTTAAAAGGAGAACTTGACCTTGTCTCTGAACCATGGCCCAGCATATCTGCAAGTGCAAAGGATCTTCTTCGAAAAATGCTTGTAAGAGACCCTAAGAAGCGACTATCGGCACGTGAAGTTCTTAGCCATCCTTGGTTCCAGACTGAAGGTTTTGCTCTTGATAAACCTCTTGATTCTGTTGTTTTAACTCGTTTGAAGCATTTCTCTGCCAGGAATAACAAGCTCAAAAAAATGGCCTTCCGGGTGATTGCTGAAAGTCTGTCGGAGGATGAAATTGCTGGGTTGAAAGAAATGTTCAAGATGATAGACACAGATAATAGTGGACACATCACTCTTGATGAGCTGAAAGTTGGATTGGAGAGAGTGGGTGCTTTCCTTAAGGATTCTGAAATTAACCAGTTAATGCAATCGGCAGACACTGACAATAGCGGTACAATAGACTATGGTGAATTCATCGCAGCTATGCTTCATGAAAACAAGGTCCAACAGGAGGATCGTCTATATACTGCCTTCTCCTATTTTGACAAAGATGGTAGTGGGTATATTACGCGAGATGAGCTCCAGCAAGCGTGTCAACAGTTTGGTCTGCAAGATGTTCAATTAGATGATATAATTCGCGAAGTTGACCAGGATAATGATGGGCGCATTGATTATAATGAGTTTGTTGCAATGATGCAAGACTCTGGTTTAAGCAAAAAGGGACTGCAAAATATCACTGAGTAG 1902 0.4585 MGNVCVGPNLGNGFLQSITSAFKKTPPQEGRLPAPNADNNNKSAENAAPDSSKDSDAPKQVQSTPPELVKIPSDEKLKPPPEPEKPAEPEVHEPTGGTAHAGKAEKPAKPEMVNHPASNNAADAGESEKPVKLEVVNEAASNNTTNAGETTKPTHVKRASSMGLRIESVLGRKTENIKDLYSLGRKLGQGQFGTTYYCLEKATGKEFACKSILKRKLNTQEDVDDVRREIQIMHHLAGHPNVIQIIGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTEKRAAELARVIVGVVEAFHSMGVMHRDLKPENFLFVNQEEEAQLKTIDFGLSVFFRPGESFTDVVGSPYYVAPEVLRKFYGQECDVWSAGVIIYILLSGVPPFWDETELGIFDQVLKGELDLVSEPWPSISASAKDLLRKMLVRDPKKRLSAREVLSHPWFQTEGFALDKPLDSVVLTRLKHFSARNNKLKKMAFRVIAESLSEDEIAGLKEMFKMIDTDNSGHITLDELKVGLERVGAFLKDSEINQLMQSADTDNSGTIDYGEFIAAMLHENKVQQEDRLYTAFSYFDKDGSGYITRDELQQACQQFGLQDVQLDDIIREVDQDNDGRIDYNEFVAMMQDSGLSKKGLQNITE 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2748 633 ProSitePatterns EF-hand calcium-binding domain. 532 544 IPR018247 -
Prci3g2748 633 CDD STKc_CAMK 181 438 - -
Prci3g2748 633 ProSiteProfiles Protein kinase domain profile. 181 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2748 633 SMART efh_1 593 621 IPR002048 GO:0005509
Prci3g2748 633 SMART efh_1 487 515 IPR002048 GO:0005509
Prci3g2748 633 SMART efh_1 523 551 IPR002048 GO:0005509
Prci3g2748 633 SMART efh_1 559 587 IPR002048 GO:0005509
Prci3g2748 633 MobiDBLite consensus disorder prediction 71 91 - -
Prci3g2748 633 ProSiteProfiles EF-hand calcium-binding domain profile. 555 590 IPR002048 GO:0005509
Prci3g2748 633 ProSiteProfiles EF-hand calcium-binding domain profile. 483 518 IPR002048 GO:0005509
Prci3g2748 633 Gene3D - 464 623 - -
Prci3g2748 633 ProSitePatterns EF-hand calcium-binding domain. 496 508 IPR018247 -
Prci3g2748 633 MobiDBLite consensus disorder prediction 18 130 - -
Prci3g2748 633 FunFam Calcium-dependent protein kinase SK5 267 451 - -
Prci3g2748 633 Pfam Protein kinase domain 181 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2748 633 SMART serkin_6 181 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2748 633 FunFam Calcium-dependent protein kinase 1 447 622 - -
Prci3g2748 633 ProSiteProfiles EF-hand calcium-binding domain profile. 519 554 IPR002048 GO:0005509
Prci3g2748 633 SUPERFAMILY EF-hand 480 619 IPR011992 -
Prci3g2748 633 Gene3D Transferase(Phosphotransferase) domain 1 267 463 - -
Prci3g2748 633 ProSitePatterns Protein kinases ATP-binding region signature. 187 214 IPR017441 GO:0005524
Prci3g2748 633 SUPERFAMILY Protein kinase-like (PK-like) 169 466 IPR011009 -
Prci3g2748 633 FunFam Calcium-dependent protein kinase 1 183 266 - -
Prci3g2748 633 ProSitePatterns EF-hand calcium-binding domain. 602 614 IPR018247 -
Prci3g2748 633 ProSitePatterns EF-hand calcium-binding domain. 568 580 IPR018247 -
Prci3g2748 633 ProSiteProfiles EF-hand calcium-binding domain profile. 593 624 IPR002048 GO:0005509
Prci3g2748 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Prci3g2748 633 Gene3D Phosphorylase Kinase; domain 1 183 266 - -
Prci3g2748 633 Pfam EF-hand domain pair 488 548 IPR002048 GO:0005509
Prci3g2748 633 Pfam EF-hand domain pair 558 619 IPR002048 GO:0005509
Prci3g2748 633 MobiDBLite consensus disorder prediction 34 62 - -
Prci3g2748 633 PANTHER SERINE/THREONINE-PROTEIN KINASE 173 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2748 Prci-Chr3 39652032 39656490 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2748 1 629 EF-hand Containing Proteins AT2G38910 65.556 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci3g2748 Pkinase 5.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2748 K13412 - jre:109013495 901.353