Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2740 ATGGGTTCTCTTCCTCACGTAGTAGAGGACTGCCTAGGTTTCCTCCAGCTTTACAGTGACGGCTCCATTTTGCGATCCGACGGCATGGATTTCAATGTTTCACTCGTAGAAGACAACTCCGTACTCTTCAAAGACTGTCTCTTCCACAAAAGATTCAATCTTTATCTTCGTGTCTTCAAACCCAAATCCTCCTCCGGCAAGCTTCCTCTCATAATGTTCATCCACGGCGGAGGGTTCTGTTTCGGCTCTCACGCCTGGCCCCACCTTCACAATTGTTGCGTTCGCATGGCTTCGGAGCTCCAGGCCGTCGTCGTGGCGCCTGATTACCGCCTCGCGCCAGAGCACCGGCTTCCGGCGGCAGTGGACGATGCTGTGGAGGCGGTGAGGTGGGTGCAGAGGCAGGCTTTGAGCAAGGATGTGGTGGATAGCGGTGGGGATGCATGGTTGAATGGTGAGGTTGACTTTGACCGAGTGTTTATAGTGGGTGACTCATCTGGCGGGAACATCGCACACCATTTGGCTGTTCGGCTGGGATCCGGATCCCTAGTAATGGATCCGGTTAGGGTACGAGGTTACGTGCTGTTGGCGCCCTTTTTTGGTGGGGAAGTTAGAACCAAGTCCGAGGAGAGCGCTCGGGAAAAAATGTTGAGCTTGGACTTACTCGACAGATTTTGGAGACTGTCAGTTCCTGTCGGAGAGAATAGAGACTACCCAATGGCGAACCCATTCGGACCTGAAAGCCCTAACCTTGAACAAGTGAAGCTTGATCCTATAATGGTGATAGTTGGAAGCAATGAATTGCTGAAGGATAGAGCATACGACTACGCACGAAGATTGAAGGAGCTAGGGAAAAAGATCGAGTACATTGAGTTTGAAGGAAGAGAACATGGATTTTTCACGCAAGATCCATACTCACAAGTTGCTGGAGAGGTGATGCAAATCCTCAAACAATTCTTGCTTGAAAATTCTGGCTCGAAGGAGATGACCTGTGTACTGTACATATAA 1005 0.5025 MGSLPHVVEDCLGFLQLYSDGSILRSDGMDFNVSLVEDNSVLFKDCLFHKRFNLYLRVFKPKSSSGKLPLIMFIHGGGFCFGSHAWPHLHNCCVRMASELQAVVVAPDYRLAPEHRLPAAVDDAVEAVRWVQRQALSKDVVDSGGDAWLNGEVDFDRVFIVGDSSGGNIAHHLAVRLGSGSLVMDPVRVRGYVLLAPFFGGEVRTKSEESAREKMLSLDLLDRFWRLSVPVGENRDYPMANPFGPESPNLEQVKLDPIMVIVGSNELLKDRAYDYARRLKELGKKIEYIEFEGREHGFFTQDPYSQVAGEVMQILKQFLLENSGSKEMTCVLYI 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2740 334 Gene3D alpha/beta hydrolase 23 320 IPR029058 -
Prci3g2740 334 PANTHER ARYLACETAMIDE DEACETYLASE 13 299 - -
Prci3g2740 334 Pfam alpha/beta hydrolase fold 71 299 IPR013094 GO:0016787
Prci3g2740 334 SUPERFAMILY alpha/beta-Hydrolases 5 319 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2740 Prci-Chr3 39618540 39620902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2740 7 302 Carbohydrate Esterase AT5G16080 34.754 7.41e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2740 - - pvu:PHAVU_001G198900g 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2253 1 43131640 43134090 Prci3g2740 3 39618540 39620902 CCT
Prci3g2740 3 39618540 39620902 Prci3g2740 3 39618540 39620902 ECH