Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2728 ATGGCTGATGCGGCGGCAATTCCTCCTGAAGCTACCAATAATATAGATCCGACGCAGATCGAGGTCAAGCTCTTTAACAGGTGGACCTTCGACGACGTTCAGGTTATTGACATCTCTCTAGCTGATTATATTGGAGTGGCGGCATCCAAGCATGCAACATATGTTCCTCACACTGCTGGTAGGTACTCAGTCAAGCGTTTCAGGAAAGCGCAGTGTCCAATAGTTGAGAGGCTTACTAATTCTCTCATGATGCACGGTAGAAACAATGGGAAGAAACTAATGGCTGTGAGAATTGTCAAACATGCCATGGAAATTATCCACCTGCTAACTGATCAGAATCCCATTCAAGTTATTGTTGATGCTGTGATCAACAGTGGTCCTCGTGAAGATGCAACTCGAATCGGATCTGCTGGTGTTGTGAGGAGACAGGCTGTGGATATCTCACCCCTTCGCCGTGTTAATCAGGCCATCTATCTCCTAACTACTGGTGCACGCGAAGCTGCATTTAGAAATATCAAGACTATTGCTGAATGCTTGGCTGATGAACTTATCAATGCAGCAAAGGGGTCATCTAACAGCTATGCTATCAAGAAGAAAGACGAGATTGAAAGAGTTGCGAAGGCAAATCGTTAA 633 0.4518 MADAAAIPPEATNNIDPTQIEVKLFNRWTFDDVQVIDISLADYIGVAASKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2728 210 Pfam Ribosomal protein S7p/S5e 64 210 IPR023798 -
Prci3g2728 210 NCBIfam 30S ribosomal protein S7 21 210 IPR005716 GO:0003735|GO:0006412|GO:0015935
Prci3g2728 210 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 210 IPR000235 GO:0006412
Prci3g2728 210 CDD uS7_Eukaryote 23 210 IPR005716 GO:0003735|GO:0006412|GO:0015935
Prci3g2728 210 PANTHER RIBOSOMAL PROTEIN S7 19 210 IPR000235 GO:0006412
Prci3g2728 210 Gene3D Ribosomal protein S7 domain 6 210 IPR036823 -
Prci3g2728 210 FunFam 40S ribosomal protein S5 6 210 - -
Prci3g2728 210 ProSitePatterns Ribosomal protein S7 signature. 76 102 IPR020606 GO:0003723|GO:0003735|GO:0006412
Prci3g2728 210 SUPERFAMILY Ribosomal protein S7 23 210 IPR036823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2728 Prci-Chr3 39562651 39566442 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2728 21 210 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 93.158 1.16e-133 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2728 K02989 - gmx:100305898 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g2728 3 39562651 39566442 Prci3g2728 3 39562651 39566442 ECH