Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2723 ATGGCTTCTAGATTCTGGACACAGGGTGGTAGTGACTCCGAGGAGGAGGAGAGTGACTATGATGAAGATGTTGAGAATGTAGCGGGTGAATCTACTAGCCAAGCTGTTAAAAGCAGATACTTGCAGGGTAATGCTAGTGACAGTGATGATTCCGATGATCAGAAGCGTGTTGTTAGGTCAGCCAAAGACAAGAGATTTGAAGAAATGTCATCTACAATTGATCAGATGAAGAATGCTATGAAGATTAATGACTGGGTGAGCTTGCAAGAGAGCTTTGATAAAATAAGCAAGCAGCTTGAGAAAGTCATGCGTATCACTGAATCTGAGAAGGTGCCTACTCTTTACATAAAGGCACTTGTGATGTTGGAAGACTTCCTGGCACAGGCTCTGGCAAACAAGGATGCCAAAAAGAAGATGAGTAGTAGTAATGCTAAAGCATTGAACTCAATGAAGCAGAAATTGAAGAAGAATAATAAGCAATATGAGGATTTGATTACTAAATATAGAGAAAATCCTGAGAGTGAGGAGGACAAAGATGAAGAGGAGAGTGAGGATGAGGATGAAAGTGAGGAGGAGGTAATTGAGGAGATTGATAAGATACAGAAGTCAGATTCTGAAGATGGCGATCAAGATGATGAGAAGTCAGATGCAACTGATGCCCCTTGGGACCAAAAACTTAGCAAGAAAGACAGGCTTATGGATAGGCAGTTTATGAAAGACCCTAGTGAGATCTCGTGGGACATGGTCAACAAGAAGTTCAAAGAGGTTGTGGCAGCTAGGGGCAGGAGGGGAACTGGAAGGTTTGAGCAGGTTGAGCAGCTTACCTTCTTAACAAAAGTTGCCAAAACGCCAGCACAGAAGCTGGAAATATTTTTCAGTGTTGTTTCTGCTCAATTTGATGTTAATCCTGGTTTAAATGGGCATATGCCTATTAATGTGTGGAAGAAATGCGTGCTGAATATGCTGGTCATTCTTGATATTCTAGTGCAGTACCCAAACATAGTTGTTGATGATACAGTGGAGCCTGATGAGAATGAAACTCAGAAGGGCACTGACTACAATGGACCAATTCGGGTATGGGGCAACTTAGTTGCATTCCTAGAAAGAATTGATGCTGAGTTTTTCAAGAGTTTGCAATGTATTGATCCCCATACTCGTGAGTATGTTGAGAGACTTAGGGATGAGCCCATGTTTCTGGCTCTTGCTCAGGACGTCCAGGAATATCTTGAAAGAGTTGGAGATTTTAAAGCTTCGTCAAAGGTAGCCCTTAGACGTGTTGAACTCATCTATTACAAACCACAGGAGGTTTATGATGCCATGAGGAAATTGGCTGAACTGGCAGATGACAATAATGGGGAGGTGGATGATGAGTCTAAAGGGTTTGAGGATACAAGGACTCCTACTGCATTTGTTGTTACTCCTGAGCTTGTTCCTCGAAAACCCACCTTCCCAGAGAATAGTAGAACGCTAATGGACTTATTGGTGTCCTTGATATATAAGTACGGGGATGAGCGGACAAAGGCACGTGCTATGCTTTGTGATATATATCACCATGCCCTTCTGGATGAGTTCTCAACTGCACGTGATCTGCTGCTTATGAGCCATTTGCAGGATAGCGTTCAGCATATGGATATATCAACGCAGATACTTTTTAACAGGGCCATGTCACAGTTAGGCCTCTGTGCTTTTCGGGTTGGACTGATTTCTGAGGCTCATGGCTGTCTCTCTGAGTTATATTCTGGTGGAAGGGTGAAGGAGCTGCTTGCACAAGGTGTCTCACAAAGTCGCTATCATGAGAAGACTCCAGAGCAGGAAAGGTTGGAAAGGAGACGCCAGATGCCATATCACATGCACATTAACCTTGAGCTCCTGGAGTTGGTACATCTTATTTGTGCTATGCTTCTGGAAGTTCCTAACATGGCAGCTAATGACTATGATGCAAAGCGCAAAGTTATTAGCAAGACTTTCCGTCGCTTGCTTGAGGTTAGCGAGAAGCAAACATTTACAGGTCCACCTGAAAATGTTAGAGATCATGTTATGGCTGCTACAAGGGCCCTTAGCAAGGGAGACTTCCATAGGAGTTATGATATCATCAAGTCGCTGGATGTCTGGAAATTTGTTAGAAATCATGAACAGGTGCTTGAAATGCTCAAGGAAAAAATCAAGGAGGAGGCACTAAGGACTTACCTCTTTACCTTCTCTTCATCCTATGATTCTTTGAGCCTTGAGCAGCTCATGAAAATGTTTGACCTCTCTGTTCCTCACACCCATAGCATTGTTAGTAGGATGATGATAAATGAGGAGCTCCATGCAAGCTGGGATCAACCAACTGGCTGCATAATTTTCCAGGATGTGAAGCACTCTAGATTGCAGGCTTTGGCATTCCAGTTGACAGAGAAGTTGTCTATTCTTGTGGAGAGTAATGAAAGAGCAATAGAGGCAAGGATAGGTGGTGGTGGGTTGGATCTTCCCCTAAGGCGGCGAGATAGTCAGGACTATGCTGCTGCTGCTGCAACATCTACTGTTGGTGGTAGGTGGCAAGACTTGTCACTTACTCAGACAAGGCAAGGCAGTAGTGGACGTGCAGGATATAGTATTGGTGGAGGAAGGCCGTTAACATTTAGCCAAAATGGCTATTCAAGGGACCGAACAGGAAGAGGAGCAGGTGGAGGCTATCAGAGCACGAGATATCAAGACTCTGCCTATGGTGGTTCTGGGAGGACAACTCAGGGTTCAGCACTTAGGGGAGCGCAGGTGGATGCATCCACTCGCATGGTTAGCCTTAAAGGAGTTCGCGCTTAA 2802 0.4433 MASRFWTQGGSDSEEEESDYDEDVENVAGESTSQAVKSRYLQGNASDSDDSDDQKRVVRSAKDKRFEEMSSTIDQMKNAMKINDWVSLQESFDKISKQLEKVMRITESEKVPTLYIKALVMLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEDLITKYRENPESEEDKDEEESEDEDESEEEVIEEIDKIQKSDSEDGDQDDEKSDATDAPWDQKLSKKDRLMDRQFMKDPSEISWDMVNKKFKEVVAARGRRGTGRFEQVEQLTFLTKVAKTPAQKLEIFFSVVSAQFDVNPGLNGHMPINVWKKCVLNMLVILDILVQYPNIVVDDTVEPDENETQKGTDYNGPIRVWGNLVAFLERIDAEFFKSLQCIDPHTREYVERLRDEPMFLALAQDVQEYLERVGDFKASSKVALRRVELIYYKPQEVYDAMRKLAELADDNNGEVDDESKGFEDTRTPTAFVVTPELVPRKPTFPENSRTLMDLLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCAFRVGLISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLELVHLICAMLLEVPNMAANDYDAKRKVISKTFRRLLEVSEKQTFTGPPENVRDHVMAATRALSKGDFHRSYDIIKSLDVWKFVRNHEQVLEMLKEKIKEEALRTYLFTFSSSYDSLSLEQLMKMFDLSVPHTHSIVSRMMINEELHASWDQPTGCIIFQDVKHSRLQALAFQLTEKLSILVESNERAIEARIGGGGLDLPLRRRDSQDYAAAAATSTVGGRWQDLSLTQTRQGSSGRAGYSIGGGRPLTFSQNGYSRDRTGRGAGGGYQSTRYQDSAYGGSGRTTQGSALRGAQVDASTRMVSLKGVRA 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2723 933 MobiDBLite consensus disorder prediction 134 153 - -
Prci3g2723 933 ProSiteProfiles PCI domain profile. 615 787 IPR000717 -
Prci3g2723 933 MobiDBLite consensus disorder prediction 853 918 - -
Prci3g2723 933 MobiDBLite consensus disorder prediction 46 70 - -
Prci3g2723 933 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 45 647 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Prci3g2723 933 Coils Coil 144 171 - -
Prci3g2723 933 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 2 861 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Prci3g2723 933 SUPERFAMILY "Winged helix" DNA-binding domain 712 787 IPR036390 -
Prci3g2723 933 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 928 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Prci3g2723 933 MobiDBLite consensus disorder prediction 167 234 - -
Prci3g2723 933 Coils Coil 707 727 - -
Prci3g2723 933 MobiDBLite consensus disorder prediction 1 70 - -
Prci3g2723 933 MobiDBLite consensus disorder prediction 135 153 - -
Prci3g2723 933 MobiDBLite consensus disorder prediction 27 45 - -
Prci3g2723 933 MobiDBLite consensus disorder prediction 12 26 - -
Prci3g2723 933 MobiDBLite consensus disorder prediction 175 194 - -
Prci3g2723 933 MobiDBLite consensus disorder prediction 891 917 - -
Prci3g2723 933 MobiDBLite consensus disorder prediction 215 234 - -
Prci3g2723 933 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 716 804 IPR000717 -
Prci3g2723 933 Pfam PCI domain 655 783 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2723 Prci-Chr3 39538071 39542922 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2723 1 933 Eukaryotic Initiation Factors Gene Family AT3G56150 68.404 0.0 1223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2723 K03252 - gmx:100779751 1459.89