Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2706 ATGAGGGGCAGAAGCTACAGTTACAGCCCCTCACCTCCAAGAGGTTATAGCAGAAGACACCGCAGTCCTAGTCCTCGGGGTCGTTATGGAGCCCGTGGTAGGGATTTGCCAACTAGTCTTCTGGTTAGGAACCTTCACAGAGATTGCAGGGCAGAAGATCTACGAGGACCTTTTGGCCGCTTTGGTCCTCTCAAGGACATTTACCTACCTCGAGATTATTATACTGGGGAGCCACGTGGATTTGGATTTGTCCAATATGTGGATCCAGCTGATGCTGCAGATGCTAAATATCACATGGACGGTCAAATTCTACTTGGTCGTGAGTTGACTGTGGTGTTTGCTGAGGAAAACAGAAAGAAGCCTGCTGAAATGAGAGCAAGAGAACGGCATAGGGGCCGATCATACAGGAGGTCTCCATCCCGGTATTCTCACTCACCACGCTATGCTCGCGCCTATTCTCGCAGTCCACAGTATACACCTTCTCCACGACGAAGCGGTTATTCCAGGTCAATATCACCAAGGGACCGGAGGTATAGGGAGCAATCATACTCCAGATCACCTTATAGGGAGCGTTTATATTCTAGAAGCCGAAGTCGAAGCAGGAGCCGAAGTTTATACTAG 621 0.496 MRGRSYSYSPSPPRGYSRRHRSPSPRGRYGARGRDLPTSLLVRNLHRDCRAEDLRGPFGRFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPAEMRARERHRGRSYRRSPSRYSHSPRYARAYSRSPQYTPSPRRSGYSRSISPRDRRYREQSYSRSPYRERLYSRSRSRSRSRSLY 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2706 206 Gene3D - 30 147 IPR012677 -
Prci3g2706 206 MobiDBLite consensus disorder prediction 169 197 - -
Prci3g2706 206 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 40 109 IPR000504 GO:0003723
Prci3g2706 206 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 37 199 - -
Prci3g2706 206 SUPERFAMILY RNA-binding domain, RBD 38 142 IPR035979 GO:0003676
Prci3g2706 206 MobiDBLite consensus disorder prediction 150 168 - -
Prci3g2706 206 SMART rrm1_1 39 112 IPR000504 GO:0003723
Prci3g2706 206 MobiDBLite consensus disorder prediction 1 35 - -
Prci3g2706 206 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 116 IPR000504 GO:0003723
Prci3g2706 206 MobiDBLite consensus disorder prediction 118 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2706 Prci-Chr3 39454065 39456919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2706 38 146 Eukaryotic Initiation Factors Gene Family AT2G36660 28.440 7.44e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2706 K12900 - rcu:8258405 244.588