Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2685 ATGGACAGAGCTTCAGAGACTAGCACTAGAGAGATCCATGACTTCATGAACGTCGATTCTTTCTCTCAGCTACCCTTCATCCGCCCTGCCCCTCTTAAAGAAAAGCCCATCAAGCTCTTCGGCATAGAATTTGGCACCCCCGAAGCCGCCACCTCAGGCGCCGCCGCTCCTCCGACCGACGATTCCGAATCGGCCGAAGATTCAAATGGGAAGGACAGCTCCGCCAACGAGAACAGTGAGACTAACCGGAGATTTGAATGCCATTACTGCTGCAGAAACTTCCCAACCTCCCAAGCCTTAGGTGGCCACCAAAACGCTCACAAACGAGAGCGCCAGCACGCCAAACGAACCCACCTTCACATGTCTGAGTCTCCAGTCTACAGCCTCGTCAACTACAGGTCCTTCTCTTCGCCGACTTCAACGCTAACCACGCCAATGCCTGCTACTAGTTATCCAACTTCTGCTGCTTATAGCGCAGCTAGGTTCTATGGAAGCCCATATTCTCATCATCATCATCACCAGCCCATCAACGGAAGCCCCTTGGCCTTTTGGCGAATCCCCACACTCCAAACTAACCCTACTTTCAACCGTGACCGTTCGTTGAATCCATTTCCCTCATTTGCCGGCGAGGATATCAACGTGAGGGCCTCATCACTGCAGCTTGGCGGGTCTGCTGCATTGCAAAACCGGTACGTCCATGACTCCAAACCCAGCGTTCAAGACCATGAGACAAGATATTGCTAA 744 0.5255 MDRASETSTREIHDFMNVDSFSQLPFIRPAPLKEKPIKLFGIEFGTPEAATSGAAAPPTDDSESAEDSNGKDSSANENSETNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRTHLHMSESPVYSLVNYRSFSSPTSTLTTPMPATSYPTSAAYSAARFYGSPYSHHHHHQPINGSPLAFWRIPTLQTNPTFNRDRSLNPFPSFAGEDINVRASSLQLGGSAALQNRYVHDSKPSVQDHETRYC 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2685 247 MobiDBLite consensus disorder prediction 48 79 - -
Prci3g2685 247 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Prci3g2685 247 SUPERFAMILY beta-beta-alpha zinc fingers 82 113 IPR036236 -
Prci3g2685 247 PANTHER ZINC FINGER PROTEIN GIS 3 242 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Prci3g2685 247 Pfam C2H2-type zinc finger 84 109 - -
Prci3g2685 247 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2685 Prci-Chr3 39366942 39370317 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2685 1 242 C2H2 Transcription Factor Family AT3G58070 38.868 7.64e-40 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2685 - - pcin:129307200 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3153 1 49536705 49537985 Prci3g2685 3 39366942 39370317 CCT
Prci3g2685 3 39366942 39370317 Prci3g2685 3 39366942 39370317 ECH