Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2679 ATGATGTGCTGTGGAGGCACGGAGGAAGAGATCGTTGGCCCACCTTCAAACCAATCCGCTGCACCACCTGGAGGGGTCAATGCATATGGTGGCGGAGGAGGAGGGGGGACACAGCCAAAGAGCAATGTTGTCAAGTCAGGCGGTCCACAGAAAGATTTATCGATTGAGGCGCCAGCTATTTCGCTGGAGGAGTTAAATAGCATCACTGGCAACTTTGGTTCCGATGCTTTGATTGGAGAAGGTTCCTATGGCCGGGTTTACTACGCCAAGTTGAGAAATGGCCAGGATGCAGCCATAAAAAAGCTGGATAACAATTCTTCTCCAGAATCTGACTCTGATTTTACAGCACAGTTATCTATAGTTTCAAGACTACAGCACGACCATTTTTTGGAGTTGATGGGATACTGTCTCGAAGATCCCAACAGAATTTTGGTTTATCAATATGCAAGCAGGGGCTCTCTGCATGACGTTTTACATGGAAGGAAAGGAGTACAAGGGGCCGAACCTGGTCCAACACTAAGCTGGAACCAGAGAGTAAAAATTGCATTTGGCGCAGCAAAAGGCCTCGAGTTTCTTCATGAGAAGTGTCAACCGTCCATAGTTCATCGTGACGTGAGATCTAGCAATGTCTTGTTGTTTGATGACTTCGACTCCAAGATTGCCGATTTCAACTTGACAAACCAGAGTTCTGACACAGCAGCTCGGCTTCATTCAACTAGAGTCTTGGGAACTTTTGGCTATCATGCTCCAGAGTATGCCATGACTGGACAGATTACCCAGAAAAGCGATGTCTATAGTTTTGGAGTGGTGCTCTTGGAACTCTTGACAGGAAGAAAGCCAGTGGACCATACAATGCCCAAGGGACAACAAAGTCTTGTAACGTGGGCAACTCCAAGGCTGAGTGAAGACAAAGTGAAACAATGTGTGGATCAGAAGCTAAACAATGAGTACCCGCCTAAGGCTGTTGCTAAGTTAGCGGCGGTTGCAGCGCTTTGTGTTCAATATGAAGCTGACTTCCGGCCAAACATGACGATAGTGGTCAAAGCTCTGCAGCCACTTCTCAATTCAAAGCCGGCTGGCCCTGAATCTGGCGCTTGA 1098 0.4754 MMCCGGTEEEIVGPPSNQSAAPPGGVNAYGGGGGGGTQPKSNVVKSGGPQKDLSIEAPAISLEELNSITGNFGSDALIGEGSYGRVYYAKLRNGQDAAIKKLDNNSSPESDSDFTAQLSIVSRLQHDHFLELMGYCLEDPNRILVYQYASRGSLHDVLHGRKGVQGAEPGPTLSWNQRVKIAFGAAKGLEFLHEKCQPSIVHRDVRSSNVLLFDDFDSKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDQKLNNEYPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPAGPESGA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2679 365 Gene3D Transferase(Phosphotransferase) domain 1 150 360 - -
Prci3g2679 365 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 38 358 - -
Prci3g2679 365 ProSiteProfiles Protein kinase domain profile. 72 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2679 365 FunFam PTI1-like tyrosine-protein kinase 3 150 359 - -
Prci3g2679 365 SUPERFAMILY Protein kinase-like (PK-like) 54 350 IPR011009 -
Prci3g2679 365 Gene3D Phosphorylase Kinase; domain 1 46 148 - -
Prci3g2679 365 SMART tyrkin_6 72 350 IPR020635 GO:0004713|GO:0006468
Prci3g2679 365 Pfam Protein tyrosine and serine/threonine kinase 77 350 IPR001245 GO:0004672|GO:0006468
Prci3g2679 365 ProSitePatterns Tyrosine protein kinases specific active-site signature. 200 212 IPR008266 GO:0004672|GO:0006468
Prci3g2679 365 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Prci3g2679 365 FunFam Pti1 kinase-like protein 48 148 - -
Prci3g2679 365 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2679 Prci-Chr3 39306774 39310320 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2679 60 364 Receptor kinase-like Gene Family AT3G58690 45.277 2.47e-87 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Prci3g2679 PK_Tyr_Ser-Thr 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2679 - - qsa:O6P43_009461 597.045