LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci3g2666	ATGCTGCTTTCTGGGGCAGCGAAGTCTCAATTACTAGCAGTAATCTTCACTATCGTTTCCCTTAATCAAGTTAGCTGCTTTTCTTTCAATTTCTCCACCTTCCAACCATCGGATGAACCTGATTTAAATTTGATCAAAAACTCGAAAATATACCTGGATGCCATCCAAGTGACCCCTGATATTCGTGGCAAGATAGCCGATTATTCTGGTCGAGCTTTCTACAAAAGGCCATACAGACTCTGGAGCAAGAGCAAGAACCAAACTGCTGAGTTTAATACCACCTTCGTGCTCAACATCAACAATCAAACTTCACCAGGGGGTGAAGGCTTGGCCTTTATATTAACCGGAGATATCGATCTTCCAGAAAACAGTGCCGGAAAATGGCTTGGAATAGTGAATGCCACAACCAATGGCACTTCTCAACCGGGGATTTTGGCAGTAGAGTTTGACACGAGACAAAACTCCGAGGAAGATGGCCCCGACAACCATCTCGGTGTCAACATCAATAGTATCAACTCCATGAGGCACGTTTCATTACCAGACTTTGGGATTACTATTGCATCGGGCATAAATGTAACAATCAGGGTAATGTATGCTGAAGATGTAATATCTGTTTTTGGTTCCATGAACGGAACTGCTGACATGAAGACTCTGCTAACTTCTCCGCCTCTGAATCTATCTTCATATCTACCGGAAGAGATCTTTTTGGGTTTCTCAGCTTCAACAAGTAACTATACGGAGCTGAACTGTGTAAGAGCTTGGGAATTCCACGGCACCCAAATTGCGGATGATGATCACCAGCTGTTGTGGGTTTGGATCGCAATTCCTGCAGTAGTACTGGTCATCCTGGGTGGGGTGATCTTTTTCTTGCTTTGGCAAAGGAATCGCCGCATGAAGATGTCAGATGAAGCAGACCCGAGAATAGAGGATCAGATTCAGTACAGCTCTATGGCCCCAAAGAAGTTCCGACTACGAGAAATCAGTAAAGCAACTGGCAGATTCAGTCCTCAAAACAAGCTTGGGGAAGGTGGCTTTGGAACTGTCTACAAGGGGTTCTTGGGAGGCAACGAGGTAGCTGTGAAAAGAGTCTCCAAGGATTCACGTCAGGGCAAGCAAGAGTTCGTAGCAGAAGTGACAATAATAGGAAGCCTTCGTCACAGAAATCTGGTGAAATTGATCGGGTGGTGTTATGAGAGCCGAGAGCTCCTCCTTGTCTATGAGTTCATGCCTAGCGGGAGCCTGGACAAGTACTTATATGATGACAAGAAGCTTGGTTGCAAAGATGGGACAATACTGAGCTGGAAAACAAGACGTAACACAATTTATGGGGTGGCACAGGCGCTAGACTATCTTCATAACGGATGCGAGAACAAGGTGCTTCACAGAGACATAAAAGCCAGCAACATACTGTTGGACTCAGACTTCACTGCCAAGTTGGGAGACTTCGGGCTAGCTCGTACCATTCAGAAGAGAGACGAAACTCACCACTCCACAAAAGCAATTGCAGGCACACCAGGCTACATGGCACCAGAAACATTCCTGACGGGGAGGGCAACAGTGGAGACGGACGTGTATGCATTTGGCGTTGTTGCATTAGAAGTCGTGTGTGGAATAAGACGAGGGAATCTGTATTCCCAGGTGGACGAGTATAAGAATAACATTGCGCATTGGGTGTGGGAGCTTTACGGGAAGGGAAAATTACTAGATGCAGTGGATAGTAGGATAAGAAAGGAAATAGCAGAGGAAAAGGTGGCAGATGTGCTTCTTCTGGGTTTGGCGTGTTGTCATCCAAACCCACACCACAGGCCATCCATGAGGACTGTAATGCAGGTTCTTACAGGGGAAGCAGCTCCACCAGCTGTACCCAAGGAAAGACCTGCTTTTGTGTGGCCTGCCTTACCTCCTTCCTTCAGCCATGACGTCGATAGCTCCATCACAGGAAGCCAATTCACTCCCTTCTTGCCAGACTTGGAGTTCACCGGCAGATGA	1989	0.4676	MLLSGAAKSQLLAVIFTIVSLNQVSCFSFNFSTFQPSDEPDLNLIKNSKIYLDAIQVTPDIRGKIADYSGRAFYKRPYRLWSKSKNQTAEFNTTFVLNINNQTSPGGEGLAFILTGDIDLPENSAGKWLGIVNATTNGTSQPGILAVEFDTRQNSEEDGPDNHLGVNINSINSMRHVSLPDFGITIASGINVTIRVMYAEDVISVFGSMNGTADMKTLLTSPPLNLSSYLPEEIFLGFSASTSNYTELNCVRAWEFHGTQIADDDHQLLWVWIAIPAVVLVILGGVIFFLLWQRNRRMKMSDEADPRIEDQIQYSSMAPKKFRLREISKATGRFSPQNKLGEGGFGTVYKGFLGGNEVAVKRVSKDSRQGKQEFVAEVTIIGSLRHRNLVKLIGWCYESRELLLVYEFMPSGSLDKYLYDDKKLGCKDGTILSWKTRRNTIYGVAQALDYLHNGCENKVLHRDIKASNILLDSDFTAKLGDFGLARTIQKRDETHHSTKAIAGTPGYMAPETFLTGRATVETDVYAFGVVALEVVCGIRRGNLYSQVDEYKNNIAHWVWELYGKGKLLDAVDSRIRKEIAEEKVADVLLLGLACCHPNPHHRPSMRTVMQVLTGEAAPPAVPKERPAFVWPALPPSFSHDVDSSITGSQFTPFLPDLEFTGR	662

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci3g2666	662	SUPERFAMILY	Concanavalin A-like lectins/glucanases	25	268	IPR013320	-
	Prci3g2666	662	SUPERFAMILY	Protein kinase-like (PK-like)	315	612	IPR011009	-
	Prci3g2666	662	Gene3D	Transferase(Phosphotransferase) domain 1	409	618	-	-
	Prci3g2666	662	CDD	lectin_legume_LecRK_Arcelin_ConA	27	256	IPR001220	GO:0030246
	Prci3g2666	662	PANTHER	-	56	622	-	-
	Prci3g2666	662	FunFam	probable L-type lectin-domain containing receptor kinase S.5	409	618	-	-
	Prci3g2666	662	FunFam	Probable L-type lectin-domain containing receptor kinase S.5	26	265	-	-
	Prci3g2666	662	Pfam	Protein kinase domain	337	610	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci3g2666	662	CDD	STKc_IRAK	340	614	-	-
	Prci3g2666	662	FunFam	Probable L-type lectin-domain containing receptor kinase S.5	319	408	-	-
	Prci3g2666	662	Gene3D	-	24	259	-	-
	Prci3g2666	662	SMART	serkin_6	334	612	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci3g2666	662	ProSitePatterns	Legume lectins beta-chain signature.	145	151	IPR019825	-
	Prci3g2666	662	Pfam	Legume lectin domain	28	266	IPR001220	GO:0030246
	Prci3g2666	662	Gene3D	Phosphorylase Kinase; domain 1	319	408	-	-
	Prci3g2666	662	ProSitePatterns	Protein kinases ATP-binding region signature.	340	361	IPR017441	GO:0005524
	Prci3g2666	662	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	459	471	IPR008271	GO:0004672\|GO:0006468
	Prci3g2666	662	ProSiteProfiles	Protein kinase domain profile.	334	628	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci3g2666	Prci-Chr3	39190092	39192537	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci3g2666	69	626	Receptor kinase-like Gene Family	AT5G10530	39.316	1.03e-119	369

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Prci3g2666		Pkinase	4.8e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci3g2666	-		-	gmx:100785031	942.954