Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2660 ATGAAGCTTAAACCTTGCATACTTGATGAGTATTCTAAGGAGAGATCTACAACACCACTCGTCAAGCCTCATAACTTCGTGCACCCAGATGATCATCTAGTTTTGGAAGATGAAAGTGGGAGAGTTAAGCTCAGCGGGGATCTGATTTCACCTTCTGTGTATATAACAGGAATCGTAGTTGCTATACATGGAAAAGAAACTGGGGCTGGTGAGTTTTTGGTTCTAGATGTCCTGGAAGCAGGCCTCCCACCACAGACAGAACTTCCTCTTAAGTCAAGGGAAGACAAATATGTTGTTTTTGTTTCGGGCTTAAGTGTTGGGAGCAGCAACTCTAATCCTCTTCAATTTCAGCTCTTCGTTGATCATGTTACTGGTCATTTAGGAGATGAGAAGGAACAAATTTTGGCATCTCAAATCGTTCATGTTGTCATAGCAGGGAATTCTGTTGAGTTCCCTCGTGAACTTCTTAATGGGCAGAATTTGGCTGCAAAGGACCTCTCAAGGTTGTCTGAACCAATAAAGGAACTTGATATTCTGTTGAATCAGATCACTGCAGGTTTGCCTTTGGATATCATGCCAGGACCCAGGGACCCAGCTAACTACTCATTACCGCAGCAGGCTTTGCATAGATGCCTTTTCCCTGGGTCATCAGCTTACAACACTTTTAGATCCTGTACAAATCCTCACTGCTTTGAGCTTGATAATATTAGATTTCTCGGGACATCAGGTCAAAATATAGATGATCTTGATAAGTATTCAGAGGCGAAAGATAAACTTGAATTCATGGAAAGGACTTTACGGTGGAGGCATTTGGCACCAACAGCGCCTAATACCCTTGGGTGCTATCCTTTCACTGATAGGGATCCTTTCTTCCTTGAGAGCTGTCCTCATGTGTATTTTGTTGGCAATCAAGATAAATATGAAACACGTGTGATTAAGGGATCAGAAGGGCAGTTGGTGAGACTCATATGCGTTCCTAAATTCAATGAGACTGGAGTGGCTGTTATGCTAAATCTGAGGGATCTTCAATGTCATGCTCTTTGTTTTGGGACGCAATTCAGCTCTTAA 1068 0.4251 MKLKPCILDEYSKERSTTPLVKPHNFVHPDDHLVLEDESGRVKLSGDLISPSVYITGIVVAIHGKETGAGEFLVLDVLEAGLPPQTELPLKSREDKYVVFVSGLSVGSSNSNPLQFQLFVDHVTGHLGDEKEQILASQIVHVVIAGNSVEFPRELLNGQNLAAKDLSRLSEPIKELDILLNQITAGLPLDIMPGPRDPANYSLPQQALHRCLFPGSSAYNTFRSCTNPHCFELDNIRFLGTSGQNIDDLDKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFFLESCPHVYFVGNQDKYETRVIKGSEGQLVRLICVPKFNETGVAVMLNLRDLQCHALCFGTQFSS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2660 355 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 1 349 IPR024826 -
Prci3g2660 355 Gene3D - 1 80 - -
Prci3g2660 355 Pfam DNA polymerase delta subunit OB-fold domain 1 77 IPR040663 -
Prci3g2660 355 Pfam DNA polymerase alpha/epsilon subunit B 98 307 IPR007185 GO:0003677|GO:0006260
Prci3g2660 355 CDD MPP_PolD2_C 97 349 IPR041863 -
Prci3g2660 355 Gene3D - 88 354 - -
Prci3g2660 355 FunFam DNA polymerase delta small subunit 83 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2660 Prci-Chr3 39160259 39165936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2660 1 354 Core DNA Replication Machinery Family AT2G42120 77.401 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2660 K02328 - qsa:O6P43_005838 644.039