Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2659 ATGGAAATCGATTCGGAGAAGAATCTCTGCAGAGCGCTTTGTGCCTACAATTCCCTGGATGAGGTGTTTGAAATTCAGAAAGAAACTTATAGGGGGCAGCAATACAGTCAGATTTACTTTGCTCGTCTTCACTTGATGAGAACTCTCCTATATTCCCTAGTATCCCGGTGGAAACCTCATTTACCTGTATGCACAGTGTTGGGACTGGAGGAGGGCAAGGAATGTATCATCGTTGGAACGCTTTATAAACACATGAAGCTTAAACCTTGCATACTTGATGAGTATTCTAAGGAGAGATCTACAACACCACTCGTCAAGCCTCATAACTTCGTGCACCCAGATGATCATCTAGTTTTGGAAGATGAAAGTGGGAGAGTTAAGCTCAGCGGGGATCTGATTTCACCTTCTGTGTATATAACAGGAATCGTAGTTGCTATACATGGAAAAGAAACTGGGGCTGGTGAGTTTTTGGTTCTAGATGTCCTGGAAGCAGGCCTCCCACCACAGACAGAACTTCCTCTTAAGTCAAGGGAAGACAAATATGTTGTTTTTGTTTCGGGCTTAAGTGTTGGGAGCAGCAACTCTAATCCTCTTCAATTTCAGCTCTTCGTTGATCATGTTACTGGTCATTTAGGAGATGAGAAGGAACAAATTTTGGCATCTCAAATCGTTCATGTTGTCATAGCAGGGAATTCTGTTGAGTTCCCTCGTGAACTTCTTAATGGGCAGAATTTGGCTGCAAAGGACCTCTCAAGGTTGTCTGAACCAATAAAGGAACTTGATATTCTGTTGAATCAGATCACTGCAGGTTTGCCTTTGGATATCATGCCAGGACCCAGGGACCCAGCTAACTACTCATTACCGCAGCAGGCTTTGCATAGATGCCTTTTCCCTGGGTCATCAGCTTACAACACTTTTAGATCCTGTACAAATCCTCACTGCTTTGAGCTTGATAATATTAGATTTCTCGGGACATCAGGTCAAAATATAGATGATCTTGATAAGTATTCAGAGGCGAAAGATAAACTTGAATTCATGGAAAGGACTTTACGGTGGAGGCATTTGGCACCAACAGCGCCTAATACCCTTGGGTGCTATCCTTTCACTGATAGGGATCCTTTCTTCCTTGAGAGCTGTCCTCATGTGTATTTTGTTGGCAATCAAGATAAATATGAAACACGTGTGATTAAGGGATCAGAAGGGCAGTTGGTGAGACTCATATGCGTTCCTAAATTCAATGAGACTGGAGTGGCTGTTATGCTAAATCTGAGGGATCTTCAATGTCATGCTCTTTGTTTTGGGACGCAATTCAGCTCTTAA 1320 0.428 MEIDSEKNLCRALCAYNSLDEVFEIQKETYRGQQYSQIYFARLHLMRTLLYSLVSRWKPHLPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSTTPLVKPHNFVHPDDHLVLEDESGRVKLSGDLISPSVYITGIVVAIHGKETGAGEFLVLDVLEAGLPPQTELPLKSREDKYVVFVSGLSVGSSNSNPLQFQLFVDHVTGHLGDEKEQILASQIVHVVIAGNSVEFPRELLNGQNLAAKDLSRLSEPIKELDILLNQITAGLPLDIMPGPRDPANYSLPQQALHRCLFPGSSAYNTFRSCTNPHCFELDNIRFLGTSGQNIDDLDKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFFLESCPHVYFVGNQDKYETRVIKGSEGQLVRLICVPKFNETGVAVMLNLRDLQCHALCFGTQFSS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2659 439 Gene3D - 172 438 - -
Prci3g2659 439 Pfam DNA polymerase alpha/epsilon subunit B 182 391 IPR007185 GO:0003677|GO:0006260
Prci3g2659 439 Pfam DNA polymerase delta subunit OB-fold domain 34 161 IPR040663 -
Prci3g2659 439 FunFam DNA polymerase delta subunit 2 40 164 - -
Prci3g2659 439 FunFam DNA polymerase delta small subunit 167 439 - -
Prci3g2659 439 CDD MPP_PolD2_C 181 433 IPR041863 -
Prci3g2659 439 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 12 433 IPR024826 -
Prci3g2659 439 Gene3D - 40 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2659 Prci-Chr3 39159811 39165936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2659 1 438 Core DNA Replication Machinery Family AT2G42120 78.082 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2659 K02328 - qsa:O6P43_005838 787.719