Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2640 ATGAACGAGAACATATTTGATTGGCAAGGGAAGATTCAACAGAGGCGTGGACTAAATGGGGATTTAAATTCTGAGTTTGGCCATCGTTCTCGTCAATATTTCAATGTCAAACAGGCTTGGAATATTGGTGGGGGAGGAGGTGAAGAGTCACCATACATGGGCTCTGCAAAATCATCTACCACCATTATGGGCGGTTTTGAATCCCCCTCTTCTGCTTTTTATGCAACAGAACGATGCATGGGGTTTCCGCAGTATCATTCCCAAGTTAACATGTACAATCCCTCTTCGAGCTCTCCATTTTCTAGGATTCACGATTTGGAACTCCCTTTGTATCAATCTCCCAGGGAAAACACTATGTTGGATCATTCGCCACACCAAGCTAATCTCAACGTCGAATTAGCAAACACCTTGCAGGCAGTGGTGAGACCCCAATTCGACCCTGAAAATCCCAACAAAACTCCATGTGGAAATTTGCCAACAGGCAAGTTTCTTCCAGTTCAACAGCACAAGTTGTTCATTGATGATGATTCTTCCTCAGTCGGGATAAACCATGCACAGGTTGGTTGTGGTTCATATAATTTACCAGTTTCTCATGTAGGCTTCTCTTCACCACAAGAGAAGCTGTCTCCAACAGTTTTAGCAGCCAGTGTTACCTCTACTGGAAATCCTACTTCTAGTGGTGGGGCAGTAATCTCAAGTAAATCACGTATAAGATGGACTCAGGATCTTCATGAGAAGTTCGTTGAATGCGTGAATCGCCTTGGGGGTGCTGAGAAGGCTACACCAAAAGCTATATTGAAGCTGATGGACACGGATGGGCTGACCGTCTTCCATGTAAAGAGTCATTTGCAGAAATATAGAATTGCAAAATACATGCCAGACCCAGCTCAAGGGAAGCCTGACAAAAAAGCCCATATAGATGATGTGCATCATGTTGATGTCAAAACTGGCTTGCAAATCAGGGAGGCACTTCAGCTACAGCTAGATGTTCAGAGGCGTCTCCATGAACAGCTAGAGTTTACTTGA 1026 0.4425 MNENIFDWQGKIQQRRGLNGDLNSEFGHRSRQYFNVKQAWNIGGGGGEESPYMGSAKSSTTIMGGFESPSSAFYATERCMGFPQYHSQVNMYNPSSSSPFSRIHDLELPLYQSPRENTMLDHSPHQANLNVELANTLQAVVRPQFDPENPNKTPCGNLPTGKFLPVQQHKLFIDDDSSSVGINHAQVGCGSYNLPVSHVGFSSPQEKLSPTVLAASVTSTGNPTSSGGAVISSKSRIRWTQDLHEKFVECVNRLGGAEKATPKAILKLMDTDGLTVFHVKSHLQKYRIAKYMPDPAQGKPDKKAHIDDVHHVDVKTGLQIREALQLQLDVQRRLHEQLEFT 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2640 341 SUPERFAMILY Homeodomain-like 232 288 IPR009057 -
Prci3g2640 341 Pfam MYB-CC type transfactor, LHEQLE motif 318 339 IPR025756 -
Prci3g2640 341 NCBIfam myb-like DNA-binding domain, SHAQKYF class 234 289 IPR006447 GO:0003677
Prci3g2640 341 Pfam Myb-like DNA-binding domain 238 287 IPR001005 -
Prci3g2640 341 FunFam Myb family transcription factor 233 291 - -
Prci3g2640 341 Gene3D - 233 292 - -
Prci3g2640 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 231 291 IPR017930 -
Prci3g2640 341 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 227 340 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2640 Prci-Chr3 39072628 39075358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2640 224 340 G2-like Transcription Factor Family AT4G28610 53.782 5.42e-38 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci3g2640 Myb_DNA-binding 7.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2640 - - ccaj:109797364 400.593