Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2639 ATGAACGAGAACATATTTGATTGGCAAGGGAAGATTCAACAGAGGCGTGGACTAAATGGGGATTTAAATTCTGAGTTTGGCCATCGTTCTCGTCAATATTTCAATGTCAAACAGGCTTGGAATATTGGTGGGGGAGGAGGTGAAGAGTCACCATACATGGGCTCTGCAAAATCATCTACCACCATTATGGGCGGTTTTGAATCCCCCTCTTCTGCTTTTTATGCAACAGAACGATGCATGGGGTTTCCGCAGTATCATTCCCAAGTTAACATGTACAATCCCTCTTCGAGCTCTCCATTTTCTAGGATTCACGATTTGGAACTCCCTTTGTATCAATCTCCCAGGGAAAACACTATGTTGGATCATTCGCCACACCAAGCTAATCTCAACGTCGAATTAGCAAACACCTTGCAGGCAGTGGTGAGACCCCAATTCGACCCTGAAAATCCCAACAAAACTCCATGTGGAAATTTGCCAACAGGCAAGTTTCTTCCAGTTCAACAGCACAAGTTGTTCATTGATGATGATTCTTCCTCAGTCGGGATAAACCATGCACAGGTTGGTTGTGGTTCATATAATTTACCAGTTTCTCATGTAGGCTTCTCTTCACCACAAGAGAAGCTGTCTCCAACAGTTTTAGCAGCCAGTGTTACCTCTACTGGAAATCCTACTTCTAGTGGTGGGGCAGTAATCTCAAGTAAATCACGTATAAGATGGACTCAGGATCTTCATGAGAAGTTCGTTGAATGCGTGAATCGCCTTGGGGGTGCTGAGAAGGCTACACCAAAAGCTATATTGAAGCTGATGGACACGGATGGGCTGACCGTCTTCCATGTAAAGAGTCATTTGCAGAAATATAGAATTGCAAAATACATGCCAGACCCAGCTCAAGGGAAGCCTGACAAAAAAGCCCATATAGATGATGTGCATCATGTTGATGTCAAAACTGGCTTGCAAATCAGGGAGGCACTTCAGCTACAGCTAGATGTTCAGAGGCGTCTCCATGAACAGCTAGAGATTCAGAGAAGATTACAGCTTCGAATTGAAGAGCAGGGAAAGCAGCTGAAGATGATGTTTGATCAGCAGCAGAAAACATGTAATAGCTTCTCCAATTTGGGCAGTACAGGAAATGATGATTCATCAGTTAGTCATAAAGAGGTTGGGGTTTCAATTGCTGAAGGGTCTGGAAATTCCTCCTTCCCTCCCAAGATAAGTTAG 1218 0.4392 MNENIFDWQGKIQQRRGLNGDLNSEFGHRSRQYFNVKQAWNIGGGGGEESPYMGSAKSSTTIMGGFESPSSAFYATERCMGFPQYHSQVNMYNPSSSSPFSRIHDLELPLYQSPRENTMLDHSPHQANLNVELANTLQAVVRPQFDPENPNKTPCGNLPTGKFLPVQQHKLFIDDDSSSVGINHAQVGCGSYNLPVSHVGFSSPQEKLSPTVLAASVTSTGNPTSSGGAVISSKSRIRWTQDLHEKFVECVNRLGGAEKATPKAILKLMDTDGLTVFHVKSHLQKYRIAKYMPDPAQGKPDKKAHIDDVHHVDVKTGLQIREALQLQLDVQRRLHEQLEIQRRLQLRIEEQGKQLKMMFDQQQKTCNSFSNLGSTGNDDSSVSHKEVGVSIAEGSGNSSFPPKIS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2639 405 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 227 391 IPR044848 GO:0003700
Prci3g2639 405 MobiDBLite consensus disorder prediction 369 405 - -
Prci3g2639 405 NCBIfam myb-like DNA-binding domain, SHAQKYF class 234 289 IPR006447 GO:0003677
Prci3g2639 405 Pfam Myb-like DNA-binding domain 238 287 IPR001005 -
Prci3g2639 405 MobiDBLite consensus disorder prediction 369 384 - -
Prci3g2639 405 Gene3D - 233 292 - -
Prci3g2639 405 FunFam Myb family transcription factor 233 291 - -
Prci3g2639 405 Pfam MYB-CC type transfactor, LHEQLE motif 318 365 IPR025756 -
Prci3g2639 405 SUPERFAMILY Homeodomain-like 232 288 IPR009057 -
Prci3g2639 405 Coils Coil 321 341 - -
Prci3g2639 405 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 231 291 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2639 Prci-Chr3 39071965 39075350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2639 224 382 G2-like Transcription Factor Family AT4G28610 54.037 2.03e-51 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci3g2639 Myb_DNA-binding 1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2639 - - ccaj:109797364 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g2639 3 39071965 39075350 Prci3g2639 3 39071965 39075350 ECH