Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2638 ATGAACGAGAACATATTTGATTGGCAAGGGAAGATTCAACAGAGGCGTGGACTAAATGGGGATTTAAATTCTGAGTTTGGCCATCGTTCTCGTCAATATTTCAATGTCAAACAGGCTTGGAATATTGGTGGGGGAGGAGGTGAAGAGTCACCATACATGGGCTCTGCAAAATCATCTACCACCATTATGGGCGGTTTTGAATCCCCCTCTTCTGCTTTTTATGCAACAGAACGATGCATGGGGTTTCCGCAGTATCATTCCCAAGTTAACATGTACAATCCCTCTTCGAGCTCTCCATTTTCTAGGATTCACGATTTGGAACTCCCTTTGTATCAATCTCCCAGGGAAAACACTATGTTGGATCATTCGCCACACCAAGCTAATCTCAACGTCGAATTAGCAAACACCTTGCAGGCAGTGGTGAGACCCCAATTCGACCCTGAAAATCCCAACAAAACTCCATGTGGAAATTTGCCAACAGGCAAGTTTCTTCCAGTTCAACAGCACAAGTTGTTCATTGATGATGATTCTTCCTCAGTCGGGATAAACCATGCAGTTGGTTGTGGTTCATATAATTTACCAGTTTCTCATGTAGGCTTCTCTTCACCACAAGAGAAGCTGTCTCCAACAGTTTTAGCAGCCAGTGTTACCTCTACTGGAAATCCTACTTCTAGTGGTGGGGCAGTAATCTCAAGTAAATCACGTATAAGATGGACTCAGGATCTTCATGAGAAGTTCGTTGAATGCGTGAATCGCCTTGGGGGTGCTGAGAAGGCTACACCAAAAGCTATATTGAAGCTGATGGACACGGATGGGCTGACCGTCTTCCATGTAAAGAGTCATTTGCAGAAATATAGAATTGCAAAATACATGCCAGACCCAGCTCAAGGGAAGCCTGACAAAAAAGCCCATATAGATGATGTGCATCATGTTGATGTCAAAACTGGCTTGCAAATCAGGGAGGCACTTCAGCTACAGCTAGATGTTCAGAGGCGTCTCCATGAACAGCTAGAGATTCAGAGAAGATTACAGCTTCGAATTGAAGAGCAGGGAAAGCAGCTGAAGATGATGTTTGATCAGCAGCAGAAAACATGTAATAGCTTCTCCAATTTGGGCAGTACAGGAAATGATGATTCATCAGTTAGTCATAAAGAGGTTGGGGTTTCAATTGCTGAAGGGTCTGGAAATTCCTCCTTCCCTCCCAAGATAAGTTAG 1215 0.4387 MNENIFDWQGKIQQRRGLNGDLNSEFGHRSRQYFNVKQAWNIGGGGGEESPYMGSAKSSTTIMGGFESPSSAFYATERCMGFPQYHSQVNMYNPSSSSPFSRIHDLELPLYQSPRENTMLDHSPHQANLNVELANTLQAVVRPQFDPENPNKTPCGNLPTGKFLPVQQHKLFIDDDSSSVGINHAVGCGSYNLPVSHVGFSSPQEKLSPTVLAASVTSTGNPTSSGGAVISSKSRIRWTQDLHEKFVECVNRLGGAEKATPKAILKLMDTDGLTVFHVKSHLQKYRIAKYMPDPAQGKPDKKAHIDDVHHVDVKTGLQIREALQLQLDVQRRLHEQLEIQRRLQLRIEEQGKQLKMMFDQQQKTCNSFSNLGSTGNDDSSVSHKEVGVSIAEGSGNSSFPPKIS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2638 404 Coils Coil 320 340 - -
Prci3g2638 404 Pfam MYB-CC type transfactor, LHEQLE motif 317 364 IPR025756 -
Prci3g2638 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 230 290 IPR017930 -
Prci3g2638 404 Pfam Myb-like DNA-binding domain 237 286 IPR001005 -
Prci3g2638 404 MobiDBLite consensus disorder prediction 368 404 - -
Prci3g2638 404 SUPERFAMILY Homeodomain-like 231 287 IPR009057 -
Prci3g2638 404 Gene3D - 232 291 - -
Prci3g2638 404 FunFam Myb family transcription factor 232 290 - -
Prci3g2638 404 NCBIfam myb-like DNA-binding domain, SHAQKYF class 233 288 IPR006447 GO:0003677
Prci3g2638 404 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 226 390 IPR044848 GO:0003700
Prci3g2638 404 MobiDBLite consensus disorder prediction 368 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2638 Prci-Chr3 39071965 39075351 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2638 223 381 G2-like Transcription Factor Family AT4G28610 54.037 2.18e-51 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci3g2638 Myb_DNA-binding 1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2638 - - ccaj:109797364 472.241