Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2626 ATGTCTTCGAGTATCAACCAGAAAACTACTCAACATGAACCACTTCTACCCCCTCCACATCGTCGACATCACCATCAGCAACCACAAAAACATCACACGCAAGATCAGCATGTTTCTTTTGGAATGACGCAATCTTCTTCTCCGTCGACGTTTTCTGTCCCCGGAAACTTCCCGAGCAAGGATTCTGGAGCTTATGATCTGCTGGAAGAGTTGGATCAAGCCCTTTTTCTCTATCTCGATGGACAACAAGACCCATCCAGCGTTCAACACCCAAGACCAGAGAACTCATTATCGTCAGAAATGAAGCCTCCGACTCTCAACATGTTCCCATCCCAACCCATGCATACACACACGCCCGCAACCAAGGCTAGCATGGAACTTGTTCCTCCTCAAATAGCCAGTGGTCCCAAAGGACCATCTGAGCCATCAATGGATTTGGCCAGCCCGAGAAACGAAGCCGCCTCGGCCCCTGAACCACCCAAAACGGCCAAGCGAGAGAGCAATCGCAAGGGTCCACCGCCAAGTTCTGAACAGGAAGCACTCAAGACCCCAGATCCTAAGACACTCAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAGCAGCTAGAGTCAAGTAGAATTAGGCTTAATCAGCTGGAGCAAGAGCTACATCGTGCTAGAGCTCAAGGAGTACTCTTCGCGGGAGCGACAGCTTTGAGGGGAGAGCAAAGCCTTCCAATGGCTATGAGCAGCGTTAGCTCAGAAGCTGCAATGTTCGACGTAGAATATGCGAGATGGCTAGAAGAGCACCATCGAATAGTGTGCGAGCTAAGAGCCGCAGTTCAAGAGCACCTTCCAGAGAACGAGCTTCGGCTGTTTGTAGATAATTGCCTGGCACATTATGACCAATTAATGAATCTCAAGAGCTTAGTGACCAAAACAGACGTATTCCACATTGTATCTGGCATGTGGAAGACCCCAGCCGAACGGTGCTTCATGTGGATCGGTGGGTTCAGGCCATCGGAGCTCATTAAGATTATTGTGAGTCAAATTGAACCCCTGACGGAGCAGCAAATACTGGGTATATATGGGTTGCAACAATCTACGCAAGAGGCAGAAGATGCACTCTCCCATGGGCTTGAGGCTCTCAATCAATCTCTCTCAGACACTATAACATCTGACTCATTGAGCTGTCCGCCAAATATGGCTAACTACATGGGACAGATGGCCATGGCCATAAATAAGCTCTCTACTTTAGAGGATTTCGTGAGACAGGCAGATAATCTGAGGCAGCAGACCATTCACCGGGTGCATGAGATACTGACGACGCGTCAGGCGGCGAGGTGCATGCTGGCGATGGCCGAGTACTTCCATCGTCTAAGAGCTCTCAGTTCTCTGTGGATGGGACGACCTCTCCAAGAATAA 1437 0.4948 MSSSINQKTTQHEPLLPPPHRRHHHQQPQKHHTQDQHVSFGMTQSSSPSTFSVPGNFPSKDSGAYDLLEELDQALFLYLDGQQDPSSVQHPRPENSLSSEMKPPTLNMFPSQPMHTHTPATKASMELVPPQIASGPKGPSEPSMDLASPRNEAASAPEPPKTAKRESNRKGPPPSSEQEALKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELHRARAQGVLFAGATALRGEQSLPMAMSSVSSEAAMFDVEYARWLEEHHRIVCELRAAVQEHLPENELRLFVDNCLAHYDQLMNLKSLVTKTDVFHIVSGMWKTPAERCFMWIGGFRPSELIKIIVSQIEPLTEQQILGIYGLQQSTQEAEDALSHGLEALNQSLSDTITSDSLSCPPNMANYMGQMAMAINKLSTLEDFVRQADNLRQQTIHRVHEILTTRQAARCMLAMAEYFHRLRALSSLWMGRPLQE 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2626 478 Coils Coil 206 233 - -
Prci3g2626 478 Pfam bZIP transcription factor 187 217 IPR004827 GO:0003700|GO:0006355
Prci3g2626 478 Gene3D - 186 234 - -
Prci3g2626 478 Pfam Seed dormancy control 278 353 IPR025422 GO:0006351|GO:0043565
Prci3g2626 478 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 185 229 IPR004827 GO:0003700|GO:0006355
Prci3g2626 478 MobiDBLite consensus disorder prediction 80 119 - -
Prci3g2626 478 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 190 205 IPR004827 GO:0003700|GO:0006355
Prci3g2626 478 MobiDBLite consensus disorder prediction 1 65 - -
Prci3g2626 478 FunFam BZIP family transcription factor 186 235 - -
Prci3g2626 478 PANTHER TRANSCRIPTION FACTOR TGA9 113 476 - -
Prci3g2626 478 SUPERFAMILY Leucine zipper domain 187 229 IPR046347 GO:0003700|GO:0006355
Prci3g2626 478 MobiDBLite consensus disorder prediction 78 189 - -
Prci3g2626 478 MobiDBLite consensus disorder prediction 33 57 - -
Prci3g2626 478 CDD bZIP_HBP1b-like 187 234 - -
Prci3g2626 478 ProSiteProfiles DOG1 domain profile. 260 474 IPR025422 GO:0006351|GO:0043565
Prci3g2626 478 SMART brlzneu 183 249 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2626 Prci-Chr3 38946623 38952978 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2626 55 478 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 60.987 3.18e-179 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci3g2626 DOG1 1.6e-31 No_clan