Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2625 ATGTCTTCGAGTATCAACCAGAAAACTACTCAACATGAACCACTTCTACCCCCTCCACATCGTCGACATCACCATCAGCAACCACAAAAACATCACACGCAAGATCAGCATGTTTCTTTTGGAATGACGCAATCTTCTTCTCCGTCGACGTTTTCTGTCCCCGGAAACTTCCCGAGCAAGGATTCTGGAGCTTATGATCTGCTGGAAGAGTTGGATCAAGCCCTTTTTCTCTATCTCGATGGACAACAAGACCCATCCAGCGTTCAACACCCAAGACAGAACTCATTATCGTCAGAAATGAAGCCTCCGACTCTCAACATGTTCCCATCCCAACCCATGCATACACACACGCCCGCAACCAAGGCTAGCATGGAACTTGTTCCTCCTCAAATAGCCAGTGGTCCCAAAGGACCATCTGAGCCATCAATGGATTTGGCCAGCCCGAGAAACGAAGCCGCCTCGGCCCCTGAACCACCCAAAACGGCCAAGCGAGAGAGCAATCGCAAGGGTCCACCGCCAAGTTCTGAACAGGAAGCACTCAAGACCCCAGATCCTAAGACACTCAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAGCAGCTAGAGTCAAGTAGAATTAGGCTTAATCAGCTGGAGCAAGAGCTACATCGTGCTAGAGCTCAAGGAGTACTCTTCGCGGGAGCGACAGCTTTGAGGGGAGAGCAAAGCCTTCCAATGGCTATGAGCAGCGTTAGCTCAGAAGCTGCAATGTTCGACGTAGAATATGCGAGATGGCTAGAAGAGCACCATCGAATAGTGTGCGAGCTAAGAGCCGCAGTTCAAGAGCACCTTCCAGAGAACGAGCTTCGGCTGTTTGTAGATAATTGCCTGGCACATTATGACCAATTAATGAATCTCAAGAGCTTAGTGACCAAAACAGACGTATTCCACATTGTATCTGGCATGTGGAAGACCCCAGCCGAACGGTGCTTCATGTGGATCGGTGGGTTCAGGCCATCGGAGCTCATTAAGATTATTGTGAGTCAAATTGAACCCCTGACGGAGCAGCAAATACTGGGTATATATGGGTTGCAACAATCTACGCAAGAGGCAGAAGATGCACTCTCCCATGGGCTTGAGGCTCTCAATCAATCTCTCTCAGACACTATAACATCTGACTCATTGAGCTGTCCGCCAAATATGGCTAACTACATGGGACAGATGGCCATGGCCATAAATAAGCTCTCTACTTTAGAGGATTTCGTGAGACAGGCAGATAATCTGAGGCAGCAGACCATTCACCGGGTGCATGAGATACTGACGACGCGTCAGGCGGCGAGGTGCATGCTGGCGATGGCCGAGTACTTCCATCGTCTAAGAGCTCTCAGTTCTCTGTGGATGGGACGACCTCTCCAAGAATAA 1434 0.4944 MSSSINQKTTQHEPLLPPPHRRHHHQQPQKHHTQDQHVSFGMTQSSSPSTFSVPGNFPSKDSGAYDLLEELDQALFLYLDGQQDPSSVQHPRQNSLSSEMKPPTLNMFPSQPMHTHTPATKASMELVPPQIASGPKGPSEPSMDLASPRNEAASAPEPPKTAKRESNRKGPPPSSEQEALKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELHRARAQGVLFAGATALRGEQSLPMAMSSVSSEAAMFDVEYARWLEEHHRIVCELRAAVQEHLPENELRLFVDNCLAHYDQLMNLKSLVTKTDVFHIVSGMWKTPAERCFMWIGGFRPSELIKIIVSQIEPLTEQQILGIYGLQQSTQEAEDALSHGLEALNQSLSDTITSDSLSCPPNMANYMGQMAMAINKLSTLEDFVRQADNLRQQTIHRVHEILTTRQAARCMLAMAEYFHRLRALSSLWMGRPLQE 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2625 477 Gene3D - 185 233 - -
Prci3g2625 477 FunFam BZIP family transcription factor 185 234 - -
Prci3g2625 477 Coils Coil 205 232 - -
Prci3g2625 477 Pfam Seed dormancy control 277 352 IPR025422 GO:0006351|GO:0043565
Prci3g2625 477 MobiDBLite consensus disorder prediction 1 64 - -
Prci3g2625 477 SMART brlzneu 182 248 IPR004827 GO:0003700|GO:0006355
Prci3g2625 477 MobiDBLite consensus disorder prediction 82 118 - -
Prci3g2625 477 Pfam bZIP transcription factor 186 216 IPR004827 GO:0003700|GO:0006355
Prci3g2625 477 PANTHER TRANSCRIPTION FACTOR TGA9 112 475 - -
Prci3g2625 477 CDD bZIP_HBP1b-like 186 233 - -
Prci3g2625 477 ProSiteProfiles DOG1 domain profile. 259 473 IPR025422 GO:0006351|GO:0043565
Prci3g2625 477 MobiDBLite consensus disorder prediction 33 57 - -
Prci3g2625 477 MobiDBLite consensus disorder prediction 82 188 - -
Prci3g2625 477 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 189 204 IPR004827 GO:0003700|GO:0006355
Prci3g2625 477 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 184 228 IPR004827 GO:0003700|GO:0006355
Prci3g2625 477 SUPERFAMILY Leucine zipper domain 186 228 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2625 Prci-Chr3 38946623 38952978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2625 55 477 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 61.261 1.17e-179 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci3g2625 DOG1 1.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2625 K14431 - gmx:100815176 685.641