Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2620 ATGGCTTCGCTCCAAGTCTGCGTCCAACTTATCCTGATGTGGCTAGTCTCCACCGTTCTGATTCGAGCCCTGCTCGCCAGATATCTCACCAAGACTCGTCTTCCACCAGGCCCGCCCTCGCTCCCTCTCATCGGACACTTCCACCTTCTTCTACCTTTACCGCATCGAGCTCTTCATCGCCTCTCCGCCCGTTATGGACCCCTCATCCATCTCTTCCTCGGCTCCGTCCCCTGTGTTGTTGCTTCCACTCCTGAAATGGCCAAACACTTCCTTAAAACCCATGAATCTTATTTCTCCAACAGGATCGTAAATACTGCCGTCCACCACTTATCATATGGATCCAAAGGCTTCCTGTTTGCAGCTTACGGACCCTACTGGAAGTTCGTGAAGAAGCTATGCATGTCCCAGCTTCTCGGTGGCCGCACCCTCGAAATCCTCCTTCCGGTGAGGCAGGCGGAGACCATGAGGTTTCTCGGAGTATTGCTCAGAAAAGGGTTGGCTGGTGAGGCCGTTGATGTTGGTCACGAGCTCATGACATTAGCCAATAGTATCATATCAAGAATGATCATGAGTAGATGTTCTTCTGGAAACGATGGTGAAGCCAGGGAAATTAGGAAGTTGGTGACGGACACGGTTGAGCTCGCCGGGGAGTTCAATCTATCTGATTTTATTTGGTTGTTTAAGACCCTCAACTTGCAGGGTCGACTGAACAAAAGGCTGAAAGAAGTCCGAGACAGGTTTGACTCGTTGATGGAGGAGGTGATAAAGGAGCATGAAGACGAAAGGAGGAAAAGGAAGGAGCTTCATGAAGATGGTCAAATAAGGGATTTGCTTGATATTTTACTGGACATACATGAAGATGAGGCTTCTGAGATAGAACTTTCCATGGAGAACATCAAGGCTTTCGTCTTGGACTTGTTCATGGCTGGAACTGACACATCTGCCCTAACCATGGAATGGGCACTAGCAGAACTCATGAATCACCCTGAGGTGATGGAGAAGGCAAGACAAGAGATCGATTCGGTCGTGGGAACAGCCAGAATAGTAGAGGAATCTGACATAGCCAATCTACCTTATTTGCAGGCCATATTTAAAGAGACTCTAAGAATTCATCCCACAGTACCATTGTTAGGGAGACTATCATCTGAGAGCTGCAATGTTGGTGGCTATGAGATTCCAGCAAAGACGTTGCTGTTTGTTAATTTGTGGTCACTTGGGAGGGACCCAGAGGTTTGGGAGGACCCACTGGAGTTCAGGCCAGAGAGATTTATGGGCATGGAAGCAAGAGGGAAGGAGAATTTGGGTGTTAGAGGACAACACTTTGAGCTGATTCCTTTTGGGAGTGGAAGAAGAAGCTGTCCGGGAGCCTCACTGGCACAACAGGTTGTGAAAACAAACATAGCTGCCATGATTCAGTGTTTTGAGTGGAAGGGGAATGGAGGCAATGGAACTGTTGATATGGAGGAGAAGCCATCTCTGACCCTTCCAAGGGCTCATCCCTTAATATGTGTCCCCGTGCCTCGTGCTAACCTCATTCCTTCTATCATGCAGGTCGTTGGGCAGGCATAG 1569 0.4882 MASLQVCVQLILMWLVSTVLIRALLARYLTKTRLPPGPPSLPLIGHFHLLLPLPHRALHRLSARYGPLIHLFLGSVPCVVASTPEMAKHFLKTHESYFSNRIVNTAVHHLSYGSKGFLFAAYGPYWKFVKKLCMSQLLGGRTLEILLPVRQAETMRFLGVLLRKGLAGEAVDVGHELMTLANSIISRMIMSRCSSGNDGEAREIRKLVTDTVELAGEFNLSDFIWLFKTLNLQGRLNKRLKEVRDRFDSLMEEVIKEHEDERRKRKELHEDGQIRDLLDILLDIHEDEASEIELSMENIKAFVLDLFMAGTDTSALTMEWALAELMNHPEVMEKARQEIDSVVGTARIVEESDIANLPYLQAIFKETLRIHPTVPLLGRLSSESCNVGGYEIPAKTLLFVNLWSLGRDPEVWEDPLEFRPERFMGMEARGKENLGVRGQHFELIPFGSGRRSCPGASLAQQVVKTNIAAMIQCFEWKGNGGNGTVDMEEKPSLTLPRAHPLICVPVPRANLIPSIMQVVGQA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2620 522 Coils Coil 233 271 - -
Prci3g2620 522 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 502 - -
Prci3g2620 522 Gene3D Cytochrome P450 29 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci3g2620 522 Pfam Cytochrome P450 35 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci3g2620 522 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci3g2620 522 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci3g2620 522 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci3g2620 522 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci3g2620 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Prci3g2620 522 SUPERFAMILY Cytochrome P450 27 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci3g2620 522 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci3g2620 522 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci3g2620 522 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci3g2620 522 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci3g2620 522 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci3g2620 522 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci3g2620 522 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci3g2620 522 FunFam Cytochrome P450 family protein 26 503 - -
Prci3g2620 522 CDD CYP93 66 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2620 Prci-Chr3 38887685 38890534 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2620 1 508 Cytochrome P450 AT5G06900 47.647 1.39e-170 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2620 K24188 - gmx:100779342 655.595