Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2608 ATGGCTGCATTCTGTATATACCTGTTCCTTCTCTCTGTGTCCTTCACAACGTTCAGTCTTGGTTCATCGTCTTCGTCAGAGGTAGATATCCTTCTCTCCTTCAAGGCCTCCATTGAAGACTCTAGGAAGGTTCTGTTAAGCTGGTCCAATACTTCGTCCACTCACTACTGTAACTGGACTGGAATCGCCTGCTCCGCCACTTCTCCTTCTCCCTCTGTCACTTCCATTAATCTTCAAAACCTAAACCTTTCTGGGGACCTCTCATCTTCCATATGCGATCTTCCAAATCTGTCGTACCTCAATCTGGCTGATAATACATTCAACCAGTCCATCCCTCTCCATCTTTCTCAGTGTAGTTCGTTGGAGACTTTGAATCTCAGTAATAATCTCATATGGGGAACCATCCCAATGCAGATTTCTCAGTTTGGTTCACTGAGAGTGCTTGATTTCAGCAGAAATCACATAGAAGGAAATATCCCAGAAAGCTTGGGCTTCCTCAAGAACCTCGAAGTCCTTAACATGGGAAGTAACCTACTATCAGGTGGTGTACCCGCAATCTTCACTAATTTAACTAAGCTTGCTGTTCTTGACTTGTCTGCAAATCCATACTTGGAAAGTGAGATTCCTGAGGGCATAGGCGGACTAGGAAGTCTCAGGCAACTTCTGTTGCAAAGTTCTGGTTTTCACGGTGAAATTCCGGATTCTTTTGCGAACCTGCGTAGTTTGACTCATTTAGACCTCTCTCAGAACAATCTAACCGGTGAGATTTCTCAGGGTCTGGTGTCTTCTCTCAAGAACCTGGTGTCTTTTGATGTTTCACAGAACAAGCTTTTGGGGTCATTTCCAAATGGCATTTGTAATGCGAAAGGTCTAATAAATCTCAGTCTCCATACAAATATTTTCAGTGGTTCAGTACCCAACAACATTGGCGAATGCAAGAATCTTGAGAGATTTCAAGTTCAGAATAACCAGTTAACTGGAGACTTCCCTGATTCATTATGGTCCTTACCTAAAGTTAAGCTCATTAGAGCTGAAAACAACAAGCTCTCAGGACAAATCCCTGAATCCATATCGGGCGCTGTTCAGTTGGAGCAAGTTCAGCTTGACAATAACAACTTTGCCGGTAAAATTCCTCAGAGTCTTGGGTCGGTCAAGAGCTTATACAGATTCTCTGCATCTCTCAATCGTTTCTACGGAGAACTTCCTGTAAATTTTTGTGATTCCCCTGTTATGAGCATTGTGAATCTCTCTCACAATTCCCTTTCTGGTCAAATCCCAGAGCTGAAAAAATGCAGGAAACTAGTTTCGTTGTCTTTAGCAGACAACAGTCTTACCGGACAAATCCCTCCTTCCCTTGCTGAGTTGCCAGTGCTAACTTATCTTGATCTTTCAGCTAACAATCTCACTGGTTCAATCCCGCTAGGACTTCAAAATTTAAAGCTTGCTCTTTTCAATGTGTCCTTCAATCAGCTATCTGGTAAGGTACCTTACTCCTTGATTTCTGGTCTCCCTGCCTCATTTTTGGAAGGAAACCCTGAACTTTGTGGCCCTGGATTACCCACTTCCTGTTCTGATGACCCTCCAAGACACCATTCTGGGAGTCTCACTGCCCTAGCATGTGCCCTTATCTCTGTAGCCTTCGTTGTAGGAACCGCGATGTTCGTTGGTGGATTTATTTTGTATAGGAAGTTTAGCAAAAGGAATCAAATAGGAGTTTGGCGTTCAGTGTTCTTCTATCCTCTTAGAATTACTGAGCATGATCTGCTTATAGTAATGGATGAGAAAAGCTTGATTGGGAATGGCGGGGTTTTTGGCAAAGTTTATGTTGTGAGTTTACCCAGCGGTGAACAAGTGGCTGTGAAGAAGCTAGTCAATTTTGGGAACCAGACATCAAAAAGTTTGAAAGCTGAGGTCAAGACATTGGCCAAGATTAGGCATAAGAATGTTGTTAAAATCCTGGGCTTTTGCCACTCCGATGAGTCAATCTTTCTTATTTATGAGTACTTGCAAGAAGGAAGCTTAGGGGACTTGATTTCCCATGAGGATTTTGAGTTGCAGTGGGAGGCAAGATTAAGGATTGCCATCAGGGTCGCTCAAGCACTAGCTTATCTTCACAATGACTATGTTCCTCACTTGCTTCACAGAAACGTCAAGTCCAAGAACATTCTGCTGGATGCAAACCTTGAGCCAAAACTCACAGATTTTGCTCTTGATCGAATTGTGGGAGAAGCCGCATTTCAGTCAACTGTTGCTTCTGAAGCAGCATCTTCCTGCTATAATGCTCCAGAATGTGGGTACAGTAAGAAAGCAACTGAAGAATTGGACATATACAGCTATGGTGTTGTATTGCTAGAGCTTGTGACTGGGAAGCAAGCGGAGCAAACAATATCAACGGAGTCTCTTGACATAGTGAAGTGGGTTCGAAGGAGAGTGAACATCACTGATGGGGTGTATCAAGTACTTGATCCCAAAATATCACATTCCAATCAGCAAGAAATGATTGGAGCTCTGGAAATTGCTCTTCGTTGCACTTCCGTGGTGCCTGAAAAAAGACCATCGATGGTAGAAGTTGTAAGAGCTCTTCAGTCGCTTGAGTGGCGAACCATCGTTGCAAATTCTCAGGATCCAAATGAGGAACCCTCGATTCCCGTGTGA 2655 0.4343 MAAFCIYLFLLSVSFTTFSLGSSSSSEVDILLSFKASIEDSRKVLLSWSNTSSTHYCNWTGIACSATSPSPSVTSINLQNLNLSGDLSSSICDLPNLSYLNLADNTFNQSIPLHLSQCSSLETLNLSNNLIWGTIPMQISQFGSLRVLDFSRNHIEGNIPESLGFLKNLEVLNMGSNLLSGGVPAIFTNLTKLAVLDLSANPYLESEIPEGIGGLGSLRQLLLQSSGFHGEIPDSFANLRSLTHLDLSQNNLTGEISQGLVSSLKNLVSFDVSQNKLLGSFPNGICNAKGLINLSLHTNIFSGSVPNNIGECKNLERFQVQNNQLTGDFPDSLWSLPKVKLIRAENNKLSGQIPESISGAVQLEQVQLDNNNFAGKIPQSLGSVKSLYRFSASLNRFYGELPVNFCDSPVMSIVNLSHNSLSGQIPELKKCRKLVSLSLADNSLTGQIPPSLAELPVLTYLDLSANNLTGSIPLGLQNLKLALFNVSFNQLSGKVPYSLISGLPASFLEGNPELCGPGLPTSCSDDPPRHHSGSLTALACALISVAFVVGTAMFVGGFILYRKFSKRNQIGVWRSVFFYPLRITEHDLLIVMDEKSLIGNGGVFGKVYVVSLPSGEQVAVKKLVNFGNQTSKSLKAEVKTLAKIRHKNVVKILGFCHSDESIFLIYEYLQEGSLGDLISHEDFELQWEARLRIAIRVAQALAYLHNDYVPHLLHRNVKSKNILLDANLEPKLTDFALDRIVGEAAFQSTVASEAASSCYNAPECGYSKKATEELDIYSYGVVLLELVTGKQAEQTISTESLDIVKWVRRRVNITDGVYQVLDPKISHSNQQEMIGALEIALRCTSVVPEKRPSMVEVVRALQSLEWRTIVANSQDPNEEPSIPV 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2608 884 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 669 869 - -
Prci3g2608 884 Gene3D Ribonuclease Inhibitor 186 261 IPR032675 -
Prci3g2608 884 Gene3D Ribonuclease Inhibitor 24 185 IPR032675 -
Prci3g2608 884 Pfam Leucine rich repeat 144 202 IPR001611 GO:0005515
Prci3g2608 884 Pfam Leucine rich repeat 217 277 IPR001611 GO:0005515
Prci3g2608 884 SUPERFAMILY L domain-like 206 520 - -
Prci3g2608 884 SUPERFAMILY L domain-like 24 302 - -
Prci3g2608 884 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 291 864 - -
Prci3g2608 884 Gene3D Phosphorylase Kinase; domain 1 589 668 - -
Prci3g2608 884 ProSiteProfiles Protein kinase domain profile. 593 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2608 884 FunFam Leucine-rich repeat family protein 26 184 - -
Prci3g2608 884 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 263 526 - -
Prci3g2608 884 FunFam probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 583 668 - -
Prci3g2608 884 Gene3D Transferase(Phosphotransferase) domain 1 669 878 - -
Prci3g2608 884 Gene3D Ribonuclease Inhibitor 262 526 IPR032675 -
Prci3g2608 884 Pfam Protein kinase domain 594 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2608 884 ProSiteProfiles Leucine-rich repeat profile. 77 98 IPR001611 GO:0005515
Prci3g2608 884 PRINTS Leucine-rich repeat signature 242 255 - -
Prci3g2608 884 PRINTS Leucine-rich repeat signature 455 468 - -
Prci3g2608 884 SMART LRR_typ_2 264 288 IPR003591 -
Prci3g2608 884 SMART LRR_typ_2 455 478 IPR003591 -
Prci3g2608 884 SMART LRR_typ_2 94 118 IPR003591 -
Prci3g2608 884 SMART LRR_typ_2 239 263 IPR003591 -
Prci3g2608 884 SMART LRR_typ_2 166 189 IPR003591 -
Prci3g2608 884 SMART LRR_typ_2 190 215 IPR003591 -
Prci3g2608 884 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Prci3g2608 884 SUPERFAMILY Protein kinase-like (PK-like) 596 861 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2608 Prci-Chr3 38789580 38792955 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2608 27 864 Receptor kinase-like Gene Family AT5G06940 63.108 0.0 1033
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci3g2608 Pkinase 6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2608 - - gmx:100794428 1386.32