Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2598 ATGATTATGACGGTTGTTTATGGAGCTGATATCACAGTTGGTAATGGGTCCTATTTCCATCTCACCCAGCAAGGAGAACTGGTCCTGTTTGATTCCTCATGGGGAATCCCTACATGGACTAGTAAAAGTAAAACAGGCAACCGATCTATTGTTTCAGCTGCTCTTCGTGATAATGGCAACCTTGTTCTACTAGACAAGGAGGGAAACATTGCTTGGCAAAGTTTTGATGATCCTTCTGATACACTTCTTCCAGGACAGAGTTTAAATGTGGATCGAACACTCCGGGCTGCAAGCAAGAATTCATTGTCCAGCTATTACACTCTATGCTTGAACGCTTCTGGTCAGTTACAGCTCCGTTGGGAAAGCAGTATTGTTTACTGGGTCAGCAGTAGCCCTTCTGCTTCAAATCTAAGTGCTATTCTTACCCCAAATGGAGCCCTGCAACTTCGGGAACAAAGTTTGAAGCCTGTTTGGTCAGTGTTTGGAGAAGACCACAATGATTCTGTGAATTACAGGTTTCTTAGGCTGGATTCAGATGGTAATCTACGCTTATATTCATGGATAGAAACTGCACAACTCTGGAGGCCAGTCTGGCAAGCTGTTGAGAATCAATGCAAGGTCTTTGCAACTTGTGGCCAGCGTGGTGTCTGTGGGTTCACTGACTCAGGCGCCGTGGATTGTAGGTGCCCCCTTGAGTTCACTAACAGCATCAATTGTTTGGTCCCATATAAGGAGTGTGGATATGGCTTCAGTATGCTTACATTCAAGAGCACATTTCTATATGGAATATACCCCCCTGATGAATCAGTTATCATAAGTAGTCTGCAGCAATGTGAGCGGTTGTGTCTGAATGATCCGCGGTGTACATTTGCAACCTACTTCAATAATGGAAGTGGTCTGTGCTCCATGAAGAAAACTCAGTATGTGACTGGTTATGCAGATCCATCTCTAAGGTCGACCTCTTTTGTCAAGGGATGTTCAGACCCATTAGCTGTAAACCCGAATCTTAAGCAACTGCCTCTATCAGAGCAGCCTCTTAGGCTTTGTCTTCCTTGTCTAGTTGGAGCAGCCACAGGCGCATTCTTCATCTTTGCTATGGTTCAGTTGGGCATTGGTTTCTGCATCTACAAAAGAAAGAGCTCTACTACAAGGAAAAAAGCCACCTTCGATCTCGCAAGCCCAAACTTGAAGGGCCTAACTATTTTATCTTTCCCAGAAATCAAGAGCCTCACTGGGGACTTCAAGAACCAAATCGGTCTAAAGATGTTCAAGGGTTTGATACCAAACAATCATCTTGTTGCAATTGTAGACCTGGATGCATCCATTGAAGAAAGGAAGTTCCGAGGTGCTGTCATGAAGATGGGAAGCATCCATCACAAGAACCTTGTGAAGCTGGAAGGCTATTGCTGTGAGTTTAATCATAGATTTTTGGTGTATGAATATGCCAAAAATGGTTCTGTGGATAGATATATAGCTGACCCAACTCTGTGCAGGAAGCTAACCTGGAGAAAAAGAATAGAGATATGCTCAAGCGTGGCAAGAGCTATCTGCTATCTGCACACTGGGTGTAGGGAGTTTGTTAGCCATGGAAATTTGAAATGTGAAAATGTTCTGTTGGATGAAAACTTCGCTGCAAAAGTGACAGATTTCGGGTTTGCAAGAATAGATGGCCGGGCATCATATTGTGGTTTTTCAGCTGAGAAGGATGTGGAGGATTTTGGGAAGTTTGTATTAACTTTGTTGAGCGGCTCTCAAAATCACGTGGAAGTTCGCGATTGGGCTTACAGAGAATGGAAGGAAGGGAGAGCTGAAAATGTGGTTGATAAAAGAATTGAAGGTGGAATGGAAATAGAGGAACTGGAACGTGCACTGAGAATAGCATTCTGGTGCGTTCAGATGGATGATCGCATGAGGCCTTCTATGGGGGAGGTGGCAAGAGTACTAGATGGTAATTTGAGTGTTGAGGCTCCACCACACCCATTTGCATTTCAGAAGCCATTACAGGAAGATGATGAAGCGCAAGGATACGGTTCAGAATCAGACCAATAA 2049 0.4407 MIMTVVYGADITVGNGSYFHLTQQGELVLFDSSWGIPTWTSKSKTGNRSIVSAALRDNGNLVLLDKEGNIAWQSFDDPSDTLLPGQSLNVDRTLRAASKNSLSSYYTLCLNASGQLQLRWESSIVYWVSSSPSASNLSAILTPNGALQLREQSLKPVWSVFGEDHNDSVNYRFLRLDSDGNLRLYSWIETAQLWRPVWQAVENQCKVFATCGQRGVCGFTDSGAVDCRCPLEFTNSINCLVPYKECGYGFSMLTFKSTFLYGIYPPDESVIISSLQQCERLCLNDPRCTFATYFNNGSGLCSMKKTQYVTGYADPSLRSTSFVKGCSDPLAVNPNLKQLPLSEQPLRLCLPCLVGAATGAFFIFAMVQLGIGFCIYKRKSSTTRKKATFDLASPNLKGLTILSFPEIKSLTGDFKNQIGLKMFKGLIPNNHLVAIVDLDASIEERKFRGAVMKMGSIHHKNLVKLEGYCCEFNHRFLVYEYAKNGSVDRYIADPTLCRKLTWRKRIEICSSVARAICYLHTGCREFVSHGNLKCENVLLDENFAAKVTDFGFARIDGRASYCGFSAEKDVEDFGKFVLTLLSGSQNHVEVRDWAYREWKEGRAENVVDKRIEGGMEIEELERALRIAFWCVQMDDRMRPSMGEVARVLDGNLSVEAPPHPFAFQKPLQEDDEAQGYGSESDQ 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2598 682 SUPERFAMILY Protein kinase-like (PK-like) 422 648 IPR011009 -
Prci3g2598 682 MobiDBLite consensus disorder prediction 659 682 - -
Prci3g2598 682 Gene3D - 76 201 IPR036426 -
Prci3g2598 682 Gene3D - 3 75 IPR036426 -
Prci3g2598 682 ProSiteProfiles Bulb-type lectin domain profile. 1 76 IPR001480 -
Prci3g2598 682 Gene3D Phosphorylase Kinase; domain 1 373 481 - -
Prci3g2598 682 Gene3D Transferase(Phosphotransferase) domain 1 482 560 - -
Prci3g2598 682 ProSiteProfiles Protein kinase domain profile. 361 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2598 682 Pfam Protein tyrosine and serine/threonine kinase 442 556 IPR001245 GO:0004672|GO:0006468
Prci3g2598 682 Pfam S-locus glycoprotein domain 166 233 IPR000858 GO:0048544
Prci3g2598 682 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 561 656 - -
Prci3g2598 682 Pfam D-mannose binding lectin 18 94 IPR001480 -
Prci3g2598 682 Pfam PAN domain 262 326 IPR003609 -
Prci3g2598 682 SUPERFAMILY alpha-D-mannose-specific plant lectins 96 195 IPR036426 -
Prci3g2598 682 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 377 481 - -
Prci3g2598 682 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 78 196 - -
Prci3g2598 682 SUPERFAMILY alpha-D-mannose-specific plant lectins 9 94 IPR036426 -
Prci3g2598 682 ProSiteProfiles Bulb-type lectin domain profile. 79 197 IPR001480 -
Prci3g2598 682 PANTHER OS07G0415500 PROTEIN 4 662 - -
Prci3g2598 682 SMART ntp_6 247 325 IPR003609 -
Prci3g2598 682 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 482 560 - -
Prci3g2598 682 Gene3D Hepatocyte Growth Factor 264 327 - -
Prci3g2598 682 ProSiteProfiles PAN/Apple domain profile. 246 326 IPR003609 -
Prci3g2598 682 Gene3D Transferase(Phosphotransferase) domain 1 561 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2598 Prci-Chr3 38673553 38677137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2598 366 678 Receptor kinase-like Gene Family AT4G23220 31.054 4.14e-40 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci3g2598 PK_Tyr_Ser-Thr 4.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2598 - - vun:114192568 941.414