Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2597 ATGCTTGAACAGGAACTTTGTTTCCTTAAACCACCGTTCTTGCTATGCATTTGCATTGGCTTCTTGCTAAATTTCACTTTGATCGCTGAGATTCCATTGGGTTCCAAACTTTTTGTGACTGACAATGACTGTTGGGTCTCCTCCAACGGTGACTTTGCATTAGGATTCTTAAACATTTCAGAGCAACCTAACCTGTATAGAATTGGCGTTCATTACAATTCAAAGTCTATGCCAACTAGCCAGCAAACTGTTGTCTGGACTGCAGGAGCTGATATCACAGTTGGTAATGGGTCCTATTTCCATCTCACCCAGCAAGGAGAACTGGTCCTGTTTGATTCCTCATGGGGAATCCCTACATGGACTAGTAAAAGTAAAACAGGCAACCGATCTATTGTTTCAGCTGCTCTTCGTGATAATGGCAACCTTGTTCTACTAGACAAGGAGGGAAACATTGCTTGGCAAAGTTTTGATGATCCTTCTGATACACTTCTTCCAGGACAGAGTTTAAATGTGGATCGAACACTCCGGGCTGCAAGCAAGAATTCATTGTCCAGCTATTACACTCTATGCTTGAACGCTTCTGGTCAGTTACAGCTCCGTTGGGAAAGCAGTATTGTTTACTGGGTCAGCAGTAGCCCTTCTGCTTCAAATCTAAGTGCTATTCTTACCCCAAATGGAGCCCTGCAACTTCGGGAACAAAGTTTGAAGCCTGTTTGGTCAGTGTTTGGAGAAGACCACAATGATTCTGTGAATTACAGGTTTCTTAGGCTGGATTCAGATGGTAATCTACGCTTATATTCATGGATAGAAACTGCACAACTCTGGAGGCCAGTCTGGCAAGCTGTTGAGAATCAATGCAAGGTCTTTGCAACTTGTGGCCAGCGTGGTGTCTGTGGGTTCACTGACTCAGGCGCCGTGGATTGTAGGTGCCCCCTTGAGTTCACTAACAGCATCAATTGTTTGGTCCCATATAAGGAGTGTGGATATGGCTTCAGTATGCTTACATTCAAGAGCACATTTCTATATGGAATATACCCCCCTGATGAATCAGTTATCATAAGTAGTCTGCAGCAATGTGAGCGGTTGTGTCTGAATGATCCGCGGTGTACATTTGCAACCTACTTCAATAATGGAAGTGGTCTGTGCTCCATGAAGAAAACTCAGTATGTGACTGGTTATGCAGATCCATCTCTAAGGTCGACCTCTTTTGTCAAGGGATGTTCAGACCCATTAGCTGTAAACCCGAATCTTAAGCAACTGCCTCTATCAGAGCAGCCTCTTAGGCTTTGTCTTCCTTGTCTAGTTGGAGCAGCCACAGGCGCATTCTTCATCTTTGCTATGGTTCAGTTGGGCATTGGTTTCTGCATCTACAAAAGAAAGAGCTCTACTACAAGGAAAAAAGCCACCTTCGATCTCGCAAGCCCAAACTTGAAGGGCCTAACTATTTTATCTTTCCCAGAAATCAAGAGCCTCACTGGGGACTTCAAGAACCAAATCGGTCTAAAGATGTTCAAGGGTTTGATACCAAACAATCATCTTGTTGCAATTGTAGACCTGGATGCATCCATTGAAGAAAGGAAGTTCCGAGGTGCTGTCATGAAGATGGGAAGCATCCATCACAAGAACCTTGTGAAGCTGGAAGGCTATTGCTGTGAGTTTAATCATAGATTTTTGGTGTATGAATATGCCAAAAATGGTTCTGTGGATAGATATATAGCTGACCCAACTCTGTGCAGGAAGCTAACCTGGAGAAAAAGAATAGAGATATGCTCAAGCGTGGCAAGAGCTATCTGCTATCTGCACACTGGGTGTAGGGAGTTTGTTAGCCATGGAAATTTGAAATGTGAAAATGTTCTGTTGGATGAAAACTTCGCTGCAAAAGTGACAGATTTCGGGTTTGCAAGAATAGATGGCCGGGCATCATATTGTGGTTTTTCAGCTGAGAAGGATGTGGAGGATTTTGGGAAGTTTGTATTAACTTTGTTGAGCGGCTCTCAAAATCACGTGGAAGTTCGCGATTGGGCTTACAGAGAATGGAAGGAAGGGAGAGCTGAAAATGTGGTTGATAAAAGAATTGAAGGTGGAATGGAAATAGAGGAACTGGAACGTGCACTGAGAATAGCATTCTGGTGCGTTCAGATGGATGATCGCATGAGGCCTTCTATGGGGGAGGTGGCAAGAGTACTAGATGGTAATTTGAGTGTTGAGGCTCCACCACACCCATTTGCATTTCAGAAGCCATTACAGGAAGATGATGAAGCGCAAGGATACGGTTCAGAATCAGACCAATAA 2292 0.4385 MLEQELCFLKPPFLLCICIGFLLNFTLIAEIPLGSKLFVTDNDCWVSSNGDFALGFLNISEQPNLYRIGVHYNSKSMPTSQQTVVWTAGADITVGNGSYFHLTQQGELVLFDSSWGIPTWTSKSKTGNRSIVSAALRDNGNLVLLDKEGNIAWQSFDDPSDTLLPGQSLNVDRTLRAASKNSLSSYYTLCLNASGQLQLRWESSIVYWVSSSPSASNLSAILTPNGALQLREQSLKPVWSVFGEDHNDSVNYRFLRLDSDGNLRLYSWIETAQLWRPVWQAVENQCKVFATCGQRGVCGFTDSGAVDCRCPLEFTNSINCLVPYKECGYGFSMLTFKSTFLYGIYPPDESVIISSLQQCERLCLNDPRCTFATYFNNGSGLCSMKKTQYVTGYADPSLRSTSFVKGCSDPLAVNPNLKQLPLSEQPLRLCLPCLVGAATGAFFIFAMVQLGIGFCIYKRKSSTTRKKATFDLASPNLKGLTILSFPEIKSLTGDFKNQIGLKMFKGLIPNNHLVAIVDLDASIEERKFRGAVMKMGSIHHKNLVKLEGYCCEFNHRFLVYEYAKNGSVDRYIADPTLCRKLTWRKRIEICSSVARAICYLHTGCREFVSHGNLKCENVLLDENFAAKVTDFGFARIDGRASYCGFSAEKDVEDFGKFVLTLLSGSQNHVEVRDWAYREWKEGRAENVVDKRIEGGMEIEELERALRIAFWCVQMDDRMRPSMGEVARVLDGNLSVEAPPHPFAFQKPLQEDDEAQGYGSESDQ 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2597 763 ProSiteProfiles Bulb-type lectin domain profile. 30 157 IPR001480 -
Prci3g2597 763 SMART ntp_6 328 406 IPR003609 -
Prci3g2597 763 ProSiteProfiles Bulb-type lectin domain profile. 160 278 IPR001480 -
Prci3g2597 763 PIRSF SRK 3 763 IPR024171 GO:0004674
Prci3g2597 763 CDD B_lectin 46 159 IPR001480 -
Prci3g2597 763 SUPERFAMILY alpha-D-mannose-specific plant lectins 177 276 IPR036426 -
Prci3g2597 763 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 175 IPR036426 -
Prci3g2597 763 Gene3D Transferase(Phosphotransferase) domain 1 563 641 - -
Prci3g2597 763 Gene3D Hepatocyte Growth Factor 345 408 - -
Prci3g2597 763 Gene3D - 30 156 IPR036426 -
Prci3g2597 763 Gene3D - 157 282 IPR036426 -
Prci3g2597 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 159 277 - -
Prci3g2597 763 ProSiteProfiles PAN/Apple domain profile. 327 407 IPR003609 -
Prci3g2597 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 458 562 - -
Prci3g2597 763 PANTHER OS07G0415500 PROTEIN 16 743 - -
Prci3g2597 763 Gene3D Transferase(Phosphotransferase) domain 1 642 740 - -
Prci3g2597 763 Pfam D-mannose binding lectin 83 175 IPR001480 -
Prci3g2597 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 158 - -
Prci3g2597 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 563 641 - -
Prci3g2597 763 Pfam Protein tyrosine and serine/threonine kinase 523 637 IPR001245 GO:0004672|GO:0006468
Prci3g2597 763 Pfam S-locus glycoprotein domain 247 314 IPR000858 GO:0048544
Prci3g2597 763 MobiDBLite consensus disorder prediction 740 763 - -
Prci3g2597 763 Pfam PAN domain 343 407 IPR003609 -
Prci3g2597 763 SMART blect_4 36 159 IPR001480 -
Prci3g2597 763 SUPERFAMILY Protein kinase-like (PK-like) 503 729 IPR011009 -
Prci3g2597 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 642 737 - -
Prci3g2597 763 ProSiteProfiles Protein kinase domain profile. 442 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2597 763 Gene3D Phosphorylase Kinase; domain 1 455 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2597 Prci-Chr3 38673553 38677278 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2597 447 759 Receptor kinase-like Gene Family AT4G23220 31.054 9.19e-40 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci3g2597 PK_Tyr_Ser-Thr 5.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2597 - - vun:114192568 1058.13