Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2596 ATGCCAACTAGCCAGCAAACTGTTGTCTGGACTGCAGGAGCTGATATCACAGTTGGTAATGGGTCCTATTTCCATCTCACCCAGCAAGGAGAACTGGTCCTGTTTGATTCCTCATGGGGAATCCCTACATGGACTAGTAAAAGTAAAACAGGCAACCGATCTATTGTTTCAGCTGCTCTTCGTGATAATGGCAACCTTGTTCTACTAGACAAGGAGGGAAACATTGCTTGGCAAAGTTTTGATGATCCTTCTGATACACTTCTTCCAGGACAGAGTTTAAATGTGGATCGAACACTCCGGGCTGCAAGCAAGAATTCATTGTCCAGCTATTACACTCTATGCTTGAACGCTTCTGGTCAGTTACAGCTCCGTTGGGAAAGCAGTATTGTTTACTGGGTCAGCAGTAGCCCTTCTGCTTCAAATCTAAGTGCTATTCTTACCCCAAATGGAGCCCTGCAACTTCGGGAACAAAGTTTGAAGCCTGTTTGGTCAGTGTTTGGAGAAGACCACAATGATTCTGTGAATTACAGGTTTCTTAGGCTGGATTCAGATGGTAATCTACGCTTATATTCATGGATAGAAACTGCACAACTCTGGAGGCCAGTCTGGCAAGCTGTTGAGAATCAATGCAAGGTCTTTGCAACTTGTGGCCAGCGTGGTGTCTGTGGGTTCACTGACTCAGGCGCCGTGGATTGTAGGTGCCCCCTTGAGTTCACTAACAGCATCAATTGTTTGGTCCCATATAAGGAGTGTGGATATGGCTTCAGTATGCTTACATTCAAGAGCACATTTCTATATGGAATATACCCCCCTGATGAATCAGTTATCATAAGTAGTCTGCAGCAATGTGAGCGGTTGTGTCTGAATGATCCGCGGTGTACATTTGCAACCTACTTCAATAATGGAAGTGGTCTGTGCTCCATGAAGAAAACTCAGTATGTGACTGGTTATGCAGATCCATCTCTAAGGTCGACCTCTTTTGTCAAGGGATGTTCAGACCCATTAGCTGTAAACCCGAATCTTAAGCAACTGCCTCTATCAGAGCAGCCTCTTAGGCTTTGTCTTCCTTGTCTAGTTGGAGCAGCCACAGGCGCATTCTTCATCTTTGCTATGGTTCAGTTGGGCATTGGTTTCTGCATCTACAAAAGAAAGAGCTCTACTACAAGGAAAAAAGCCACCTTCGATCTCGCAAGCCCAAACTTGAAGGGCCTAACTATTTTATCTTTCCCAGAAATCAAGAGCCTCACTGGGGACTTCAAGAACCAAATCGGTCTAAAGATGTTCAAGGGTTTGATACCAAACAATCATCTTGTTGCAATTGTAGACCTGGATGCATCCATTGAAGAAAGGAAGTTCCGAGGTGCTGTCATGAAGATGGGAAGCATCCATCACAAGAACCTTGTGAAGCTGGAAGGCTATTGCTGTGAGTTTAATCATAGATTTTTGGTGTATGAATATGCCAAAAATGGTTCTGTGGATAGATATATAGCTGACCCAACTCTGTGCAGGAAGCTAACCTGGAGAAAAAGAATAGAGATATGCTCAAGCGTGGCAAGAGCTATCTGCTATCTGCACACTGGGTGTAGGGAGTTTGTTAGCCATGGAAATTTGAAATGTGAAAATGTTCTGTTGGATGAAAACTTCGCTGCAAAAGTGACAGATTTCGGGTTTGCAAGAATAGATGGCCGGGCATCATATTGTGGTTTTTCAGCTGAGAAGGATGTGGAGGATTTTGGGAAGTTTGTATTAACTTTGTTGAGCGGCTCTCAAAATCACGTGGAAGTTCGCGATTGGGCTTACAGAGAATGGAAGGAAGGGAGAGCTGAAAATGTGGTTGATAAAAGAATTGAAGGTGGAATGGAAATAGAGGAACTGGAACGTGCACTGAGAATAGCATTCTGGTGCGTTCAGATGGATGATCGCATGAGGCCTTCTATGGGGGAGGTGGCAAGAGTACTAGATGGTAATTTGAGTGTTGAGGCTCCACCACACCCATTTGCATTTCAGAAGCCATTACAGGAAGATGATGAAGCGCAAGGATACGGTTCAGAATCAGACCAATAA 2064 0.4433 MPTSQQTVVWTAGADITVGNGSYFHLTQQGELVLFDSSWGIPTWTSKSKTGNRSIVSAALRDNGNLVLLDKEGNIAWQSFDDPSDTLLPGQSLNVDRTLRAASKNSLSSYYTLCLNASGQLQLRWESSIVYWVSSSPSASNLSAILTPNGALQLREQSLKPVWSVFGEDHNDSVNYRFLRLDSDGNLRLYSWIETAQLWRPVWQAVENQCKVFATCGQRGVCGFTDSGAVDCRCPLEFTNSINCLVPYKECGYGFSMLTFKSTFLYGIYPPDESVIISSLQQCERLCLNDPRCTFATYFNNGSGLCSMKKTQYVTGYADPSLRSTSFVKGCSDPLAVNPNLKQLPLSEQPLRLCLPCLVGAATGAFFIFAMVQLGIGFCIYKRKSSTTRKKATFDLASPNLKGLTILSFPEIKSLTGDFKNQIGLKMFKGLIPNNHLVAIVDLDASIEERKFRGAVMKMGSIHHKNLVKLEGYCCEFNHRFLVYEYAKNGSVDRYIADPTLCRKLTWRKRIEICSSVARAICYLHTGCREFVSHGNLKCENVLLDENFAAKVTDFGFARIDGRASYCGFSAEKDVEDFGKFVLTLLSGSQNHVEVRDWAYREWKEGRAENVVDKRIEGGMEIEELERALRIAFWCVQMDDRMRPSMGEVARVLDGNLSVEAPPHPFAFQKPLQEDDEAQGYGSESDQ 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2596 687 Pfam S-locus glycoprotein domain 171 238 IPR000858 GO:0048544
Prci3g2596 687 MobiDBLite consensus disorder prediction 664 687 - -
Prci3g2596 687 ProSiteProfiles Bulb-type lectin domain profile. 84 202 IPR001480 -
Prci3g2596 687 SMART ntp_6 252 330 IPR003609 -
Prci3g2596 687 SUPERFAMILY Protein kinase-like (PK-like) 427 653 IPR011009 -
Prci3g2596 687 Gene3D Transferase(Phosphotransferase) domain 1 566 664 - -
Prci3g2596 687 SUPERFAMILY alpha-D-mannose-specific plant lectins 7 134 IPR036426 -
Prci3g2596 687 Pfam Protein tyrosine and serine/threonine kinase 447 561 IPR001245 GO:0004672|GO:0006468
Prci3g2596 687 Gene3D Phosphorylase Kinase; domain 1 378 486 - -
Prci3g2596 687 ProSiteProfiles Bulb-type lectin domain profile. 1 81 IPR001480 -
Prci3g2596 687 SMART blect_4 1 83 IPR001480 -
Prci3g2596 687 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 487 565 - -
Prci3g2596 687 Pfam D-mannose binding lectin 7 99 IPR001480 -
Prci3g2596 687 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 382 486 - -
Prci3g2596 687 ProSiteProfiles PAN/Apple domain profile. 251 331 IPR003609 -
Prci3g2596 687 CDD B_lectin 3 83 IPR001480 -
Prci3g2596 687 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 83 201 - -
Prci3g2596 687 Pfam PAN domain 267 331 IPR003609 -
Prci3g2596 687 Gene3D Transferase(Phosphotransferase) domain 1 487 565 - -
Prci3g2596 687 Gene3D Hepatocyte Growth Factor 269 332 - -
Prci3g2596 687 PANTHER OS07G0415500 PROTEIN 4 667 - -
Prci3g2596 687 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 566 661 - -
Prci3g2596 687 SUPERFAMILY alpha-D-mannose-specific plant lectins 101 200 IPR036426 -
Prci3g2596 687 Gene3D - 81 206 IPR036426 -
Prci3g2596 687 Gene3D - 1 80 IPR036426 -
Prci3g2596 687 ProSiteProfiles Protein kinase domain profile. 366 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2596 Prci-Chr3 38673553 38677278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2596 371 683 Receptor kinase-like Gene Family AT4G23220 31.054 3.83e-40 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci3g2596 PK_Tyr_Ser-Thr 4.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2596 - - vun:114192568 957.592