Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2569 ATGGAAATTCTGTTTTTGTTGTGTTTTGTGGTTGCTTGGTATGTGTCAAAATCTCGTCTTGTAGTTGTGGGTGCTGAGCTACAGGATCAAACTATACTGCTTGCCCTCAACCAAGAGCTTAAAGTACCGAGATGGGATGCTAACAACTCAAGTTACTGCTCTTGGCAAGGCGTTAGCTGCAATGACCGCTTAATGGTCGTGAAGCTCGATCTGTCTCATGCAAACCTCCGAGGTAATGTCACTCCAGTTTCCCAGCTCAAAGCTCTTCGGCAACTTGACCTTTCAAATAACAATTTTCATGGCTACATTCCTCCTGCTTTTGGAAATTTATCTGATCTTGAAGTTCTAGATTTGTCTTCAAATAAGTTCGAAGGTTCAATTCCACCAGAATTGGGTGGCCTCAGGAATCTTAAATCGTTAAACCTTTCCAACAATTTGCTTGTGGGGAAAATACCAAGTGAACTTCATGGCCTAGAGAAATTGCAGGAGTTTCAAGCCTCTAGTAATCAATTAAATGGATCTTTACCTACTTGGGTAGGAAACTTTACCAACCTCAGAGTTTTGGCTGCCTATGAGAACCTTCTAGGTGGTAGGATTCCAGATAATCTTGGCTTGGTTTCTGAGCTTCAAATTCTTAATCTGCATTCAAACCAGCTTGAAGGCCCTATACCAGCAAGCATTTTTACTTCAGGGAAGCTGGAAGTTCTGGTTCTGACCCAGAACAATTTGAGTGGTAATATTCCTCAAGAACTTGGGAATTGCCAAGGCCTTTCCAATGTCCGAATTGGAAACAACCATCTAGTAGGTACTATTCCTAAGACCATAGGAAACATTAGTAGTCTGACCTACTTTGAAGCAGACAATAACAATCTTTCTGGTGAGGTAGTGTCTGAATTTTCTCAGTGTTCTAATCTCACCCTTCTGAACTTAGCTTCGAATGGATTCAGTGGAACGATTCCACCAGAACTTGGACTGCTTATGAACCTCCAGGAATTAATTCTTTCTGGAAATAGCCTATTTGGCAATATTCCAGAATCAATTTTAAGGTGCAGGAATCTTAACAAGCTCGATCTAAGCAATAACAGGTTCAATGGAACACTACCAAATGACATCTGCAAATTATCTAGGCTGCAGTTCTTGCTATTGGGTCAGAATTCCATAGGAGGGGTGATCCCTCATGAAATTGGAAATTGTGCAAAACTTCTTGAGCTGCAATTGGGCAGTAACTATTTGACTGGAATTATCCCTTCTGAGATTGGTCACATTAGGAACTTGCAGATTGCTTTAAATTTGAGCTTCAATCATCTTCATGGATCACTGCCTCCCGAGTTAGGAAGACTGGACAAACTTGTTTCTCTGGATGTTTCGAACAATAGGCTCTCAGGCAATATCCCAGCTGAGCTGAAGGGTATGTTGAGCTTAATAGAGGTTAACTTTTCAAATAATTTGCTCACCGGCCCAGTACCAACATTTGTGCCATTCCAAAAGAGCCCCAATTCAAGTTTTATAGGTAATAAAGGGCTTTGTGGAGAGCCATTAAACTCTTCATGTGGAGATCTTTATGATGACAGCAATAACTACCATCATAGAGTCTCTTACAGAATCATACTTGCTGTAATTGGTTCTGGTTTGGCAGTCTTTATGTCAGTCACCGTGGTGGTCTTACTTTTTATGCTTAGAGAGAGGCAAGAAAAAGCAGCCAAGGATGCTGGGATGCTTGATGATGAAACTAATAACAAACCAACCATAGTAGCAGGGAGTGTCTTTGTTGAGAATCTAAGACAAGCGGTAGACCTTGATACTGTTGTTAAGGCAACCCTCAGAGATTCTAATAAGCTCAGCAGTGGTACTTTCAGTTCAGTTTACAAGGCAGTTATGCCTTCTGGGATGGTCTTGTCTGTTAGGAGACTCAAGTCCATGGATAAGACAATAATCCACCACCAAAACAAGATGATTAGAGAACTTGAGAGGCTGAGCAAACTCTGCCATGACAATCTGGTTCGACCCATCGGATATGTTATTTATGAAGATGTTGCCCTTCTATTGCATCATTTTTTACCCAATGGAACATTGGCTCAATTTCTTCATGAATCTAGCAAGCAACGTGAATATCAACCCGACTGGCCTACTAGATTATCCATTGCCATTGGCGTGGCAGAAGGTCTGGCTTTCCTGCATCATGTGGCCATTATCCACCTTGACATTTCTTCTGGCAATGTTCTTTTGGATGCAAATTTCAAGCCTTTGCTTGGGGAGATTGAGATATCAAAACTTCTCGATCCAACCAGGGGTACTGCAAGTATTAGTGCTGTTGCTGGTTCCTTTGGATACATACCACCAGAATATGCATATACAATGCAAGTTACAGCACCTGGAAATGTCTACAGTTATGGTGTAGTCCTGCTTGAGATCCTTACGACTCGACCACCAGTTGATGAGGATTTCGATGAAGGCATAGACTTAGTTAAGTGGGTTCATAGTGCTCCAGTAAGAGGGGAAACTCCAGAGCAGATACTCGATGCAAGGCTCAGCACAGTATCATTTGGTTGGAGGAAAGAAATGCTTGCCGCTTTGAAGGTTGCATTGCTCTGCACTGATACTACACCTGCAAAACGACCTAAGATGAAGAAGGTAGTGGAAATGCTCCAAGAAATAAGGCAAAACTGA 2667 0.4184 MEILFLLCFVVAWYVSKSRLVVVGAELQDQTILLALNQELKVPRWDANNSSYCSWQGVSCNDRLMVVKLDLSHANLRGNVTPVSQLKALRQLDLSNNNFHGYIPPAFGNLSDLEVLDLSSNKFEGSIPPELGGLRNLKSLNLSNNLLVGKIPSELHGLEKLQEFQASSNQLNGSLPTWVGNFTNLRVLAAYENLLGGRIPDNLGLVSELQILNLHSNQLEGPIPASIFTSGKLEVLVLTQNNLSGNIPQELGNCQGLSNVRIGNNHLVGTIPKTIGNISSLTYFEADNNNLSGEVVSEFSQCSNLTLLNLASNGFSGTIPPELGLLMNLQELILSGNSLFGNIPESILRCRNLNKLDLSNNRFNGTLPNDICKLSRLQFLLLGQNSIGGVIPHEIGNCAKLLELQLGSNYLTGIIPSEIGHIRNLQIALNLSFNHLHGSLPPELGRLDKLVSLDVSNNRLSGNIPAELKGMLSLIEVNFSNNLLTGPVPTFVPFQKSPNSSFIGNKGLCGEPLNSSCGDLYDDSNNYHHRVSYRIILAVIGSGLAVFMSVTVVVLLFMLRERQEKAAKDAGMLDDETNNKPTIVAGSVFVENLRQAVDLDTVVKATLRDSNKLSSGTFSSVYKAVMPSGMVLSVRRLKSMDKTIIHHQNKMIRELERLSKLCHDNLVRPIGYVIYEDVALLLHHFLPNGTLAQFLHESSKQREYQPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLLGEIEISKLLDPTRGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRPPVDEDFDEGIDLVKWVHSAPVRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDTTPAKRPKMKKVVEMLQEIRQN 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2569 888 SUPERFAMILY L domain-like 196 513 - -
Prci3g2569 888 SUPERFAMILY Protein kinase-like (PK-like) 606 885 IPR011009 -
Prci3g2569 888 SUPERFAMILY L domain-like 42 294 - -
Prci3g2569 888 Pfam Leucine rich repeat 328 387 IPR001611 GO:0005515
Prci3g2569 888 Pfam Leucine rich repeat 88 147 IPR001611 GO:0005515
Prci3g2569 888 SMART LRR_typ_2 447 470 IPR003591 -
Prci3g2569 888 SMART LRR_typ_2 134 157 IPR003591 -
Prci3g2569 888 SMART LRR_typ_2 326 350 IPR003591 -
Prci3g2569 888 SMART LRR_typ_2 206 230 IPR003591 -
Prci3g2569 888 SMART LRR_typ_2 86 109 IPR003591 -
Prci3g2569 888 SMART LRR_typ_2 374 398 IPR003591 -
Prci3g2569 888 SMART LRR_typ_2 110 133 IPR003591 -
Prci3g2569 888 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 577 685 - -
Prci3g2569 888 Pfam Leucine rich repeat N-terminal domain 31 61 IPR013210 -
Prci3g2569 888 FunFam Leucine-rich repeat receptor-like kinase 28 129 - -
Prci3g2569 888 ProSitePatterns Tyrosine protein kinases specific active-site signature. 730 742 IPR008266 GO:0004672|GO:0006468
Prci3g2569 888 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 280 886 - -
Prci3g2569 888 Pfam Protein tyrosine and serine/threonine kinase 610 882 IPR001245 GO:0004672|GO:0006468
Prci3g2569 888 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 686 888 - -
Prci3g2569 888 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 226 520 - -
Prci3g2569 888 Gene3D Ribonuclease Inhibitor 259 524 IPR032675 -
Prci3g2569 888 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 130 223 - -
Prci3g2569 888 Gene3D Transferase(Phosphotransferase) domain 1 686 888 - -
Prci3g2569 888 CDD STKc_IRAK 613 885 - -
Prci3g2569 888 Gene3D Phosphorylase Kinase; domain 1 572 685 - -
Prci3g2569 888 ProSiteProfiles Protein kinase domain profile. 607 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g2569 888 Gene3D Ribonuclease Inhibitor 26 178 IPR032675 -
Prci3g2569 888 Gene3D Ribonuclease Inhibitor 183 258 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2569 Prci-Chr3 38556984 38561406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2569 1 887 Receptor kinase-like Gene Family AT2G41820 71.910 0.0 1281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci3g2569 PK_Tyr_Ser-Thr 2.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2569 - - gmx:100789684 1470.68